RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 GPR89AB7ZAQ6 455 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 VILLO15195 856 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 VEGFDO43915 354 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 WNT1P04628 370 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 GPR89BP0CG08 455 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 THEGLP0DJG4 465 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 KELP23276 732 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 HTR1BP28222 390 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 PMLP29590 882 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 HSD17B3P37058 310 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC29A2Q14542 456 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 KHDC1Q4VXA5 237 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 MACC1Q6ZN28 852 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 RBFAQ8N0V3 343 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC22A18ASQ8N1D0 253 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 GDAP1Q8TB36 358 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 KLHDC7BQ96G42 594 aa16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 OAS3Q9Y6K5 1087 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 CXorf49A8MYA2 514 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 CFAP99D6REC4 459 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 MAGEC1O60732 1142 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 EPN2O95208 641 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 S1PR4O95977 384 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 UQCRHP07919 91 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 RALBP11234 206 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 NSG1P42857 185 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 LEPRP48357 1165 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 THOP1P52888 689 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 ADARP55265 1226 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 B4GALNT1Q00973 533 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 CTBP1Q13363 440 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 BEND6Q5SZJ8 279 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 LDB1Q86U70 411 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TRIM74Q86UV6 250 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 LPGAT1Q92604 370 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 WDR92Q96MX6 357 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TMEM74BQ9NUR3 256 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 ARGLU1Q9NWB6 273 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 RAB23Q9ULC3 237 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC17A4Q9Y2C5 497 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 GON4LQ3T8J9 2241 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TNFRSF10CO14798 259 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 MTX2O75431 263 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 NDUFS3O75489 264 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 NUDT17P0C025 328 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 ZNF7P17097 686 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 MSH3P20585 1137 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 AKT1P31749 480 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 PDE1CQ14123 709 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TEAD4Q15561 434 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TPRG1LQ5T0D9 272 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 ADGRG6Q86SQ4 1221 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 LRRC6Q86X45 466 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 SKA1Q96BD8 255 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 MCMBPQ9BTE3 642 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 BOCQ9BWV1 1114 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC17A6Q9P2U8 582 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 FETUBQ9UGM5 382 aa16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 SMG5Q9UPR3 1016 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-203ENST00000586486 TMEM202A6NGA9 273 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 TLR4O00206 839 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 AP2A2O94973 939 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 CEACAM5P06731 702 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 RPS3P23396 243 aaKnown RBP eCLIP16.77■□□□□ 0.275e-11■■■□□ 15.8
PRKCSH-203ENST00000586486 MPP1Q00013 466 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 TMEM115Q12893 351 aaPredicted RBP16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 EFTUD2Q15029 972 aaKnown RBP eCLIP16.77■□□□□ 0.272e-8■■■■■ 42.8
PRKCSH-203ENST00000586486 LAIR1Q6GTX8 287 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 PNPLA1Q8N8W4 532 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 OR56A4Q8NGH8 313 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 CEP76Q8TAP6 659 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 PIGKQ92643 395 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 CCDC97Q96F63 343 aaPredicted RBP16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 DCUN1D1Q96GG9 259 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 SCARF2Q96GP6 870 aaPredicted RBP16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 CPNE1Q99829 537 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 OR2AG1Q9H205 316 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 P2RY12Q9H244 342 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 RMI1Q9H9A7 625 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 ARFGAP3Q9NP61 516 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 FBXO6Q9NRD1 293 aaPredicted RBP16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 ATXN10Q9UBB4 475 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 PSAT1Q9Y617 370 aa16.77■□□□□ 0.27
PRKCSH-203ENST00000586486 QSOX1O00391 747 aa16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 PRMT5O14744 637 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 CHUKO15111 745 aa16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 OR1I1O60431 355 aa16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 PIAS1O75925 651 aa16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 CDK14O94921 469 aa16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 ATP1B2P14415 290 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-203ENST00000586486 GABRB3P28472 473 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms