RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
CHAF1A-202ENST00000585371 ZMIZ1Q9ULJ6 1067 aa13.2□□□□□ -0.3
CHAF1A-202ENST00000585371 TMEM98Q9Y2Y6 226 aa13.2□□□□□ -0.3
CHAF1A-202ENST00000585371 TEX264Q9Y6I9 313 aa13.2□□□□□ -0.3
CHAF1A-202ENST00000585371 MTX2O75431 263 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 GOT2P00505 430 aaKnown RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 IVLP07476 585 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 GIMD1P0DJR0 217 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ECHS1P30084 290 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 GUCY2DQ02846 1103 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 BNIP3Q12983 259 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ITGA9Q13797 1035 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 SEMA3AQ14563 771 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 HIF1AQ16665 826 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ANKRD20A4Q4UJ75 823 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 DNTTIP2Q5QJE6 756 aaKnown RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 GPRC6AQ5T6X5 926 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 KIAA0930Q6ICG6 404 aaPredicted RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 DBX2Q6ZNG2 339 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 SNX20Q7Z614 316 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 EBNA1BP2Q99848 306 aaKnown RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 GTPBP2Q9BX10 602 aaKnown RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 FAM96AQ9H5X1 160 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ASB8Q9H765 288 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 EPB41L5Q9HCM4 733 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 TRIM39Q9HCM9 518 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 NEUROG3Q9Y4Z2 214 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 ST14Q9Y5Y6 855 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 DGKBQ9Y6T7 804 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
CHAF1A-202ENST00000585371 IGLV3-16A0A075B6K0 115 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PRSS38A1L453 326 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 MAGEB16A2A368 324 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 NDC80O14777 642 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 CHUKO15111 745 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SGTAO43765 313 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 DFNA5O60443 496 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PIAS2O75928 621 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 USP1O94782 785 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SLC25A14O95258 325 aaPredicted RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 TRIM16O95361 564 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 CER1O95813 267 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 ZNF8P17098 575 aaPredicted RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SPINK2P20155 84 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 KELP23276 732 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 HTR1BP28222 390 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 EPHA8P29322 1005 aaPredicted RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 ELK3P41970 407 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 HK3P52790 923 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PLTPP55058 493 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 ARL4CP56559 192 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SRP54P61011 504 aaKnown RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 B4GALNT1Q00973 533 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PHYKPLQ8IUZ5 450 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PHACTR4Q8IZ21 702 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 NXPE1Q8N323 547 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SLC25A45Q8N413 288 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 OXR1Q8N573 874 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SAP25Q8TEE9 199 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 GATA6Q92908 595 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 VPS18Q9P253 973 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 MARCH4Q9P2E8 410 aaPredicted RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 KLQ9UEF7 1012 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 SLC30A1Q9Y6M5 507 aa13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 COL5A1P20908 1838 aaPredicted RBP13.18□□□□□ -0.3
CHAF1A-202ENST00000585371 NUAK1O60285 661 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 CELA2BP08218 269 aaPredicted RBP13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 CD59P13987 128 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 ITGALP20701 1170 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 IL9RQ01113 521 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 CAV1Q03135 178 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 PPARDQ03181 441 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 CACNG1Q06432 222 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 TMEM115Q12893 351 aaPredicted RBP13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 DBN1Q16643 649 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 GPR33Q49SQ1 333 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 PYCR3Q53H96 274 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 ZRANB3Q5FWF4 1079 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 HP1BP3Q5SSJ5 553 aaPredicted RBP13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 LDLRAP1Q5SW96 308 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 STEAP4Q687X5 459 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 AFTPHQ6ULP2 937 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 SERPINA9Q86WD7 417 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
CHAF1A-202ENST00000585371 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms