RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 DPM1O60762 260 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 CLDN7O95471 211 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 NELFEP18615 380 aaKnown RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 AMPD1P23109 780 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 PTPN4P29074 926 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 SPINT3P49223 89 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 INSCQ1MX18 579 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 ANKRD20A8PQ5CZ79 823 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 ALG1LQ6GMV1 187 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 TIGD7Q6NT04 549 aaPredicted RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 SLAMF7Q9NQ25 335 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
COPS3-218ENST00000584216 EPHA6Q9UF33 1036 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
COPS3-218ENST00000584216 PCYT1BQ9Y5K3 369 aaPredicted RBP13.16□□□□□ -0.3
COPS3-218ENST00000584216 PDZK1P1A8MUH7 402 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 LGALS16A8MUM7 142 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
COPS3-218ENST00000584216 LEPRP48357 1165 aaKnown RBP13.15□□□□□ -0.3
COPS3-218ENST00000584216 ZNF165P49910 485 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ACY1Q03154 408 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 UBXN1Q04323 297 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TUBB3Q13509 450 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 INPP5JQ15735 1006 aaPredicted RBP13.15□□□□□ -0.3
COPS3-218ENST00000584216 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TDRD12Q587J7 1177 aaKnown RBP13.15□□□□□ -0.3
COPS3-218ENST00000584216 IRGCQ6NXR0 463 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
COPS3-218ENST00000584216 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 UBXN4Q92575 508 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 HSPH1Q92598 858 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 CXorf40BQ96DE9 158 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ING2Q9H160 280 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 RAD18Q9NS91 495 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 CHKBQ9Y259 395 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
COPS3-218ENST00000584216 KMOO15229 486 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
COPS3-218ENST00000584216 MYBL1P10243 752 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
COPS3-218ENST00000584216 VCLP18206 1134 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 ARL4DP49703 201 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 CCL11P51671 97 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 PDPK2PQ6A1A2 396 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 PRR7Q8TB68 274 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 TEKT4Q8WW24 435 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 WDR24Q96S15 920 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 TIMM29Q9BSF4 260 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 MLPHQ9BV36 600 aaPredicted RBP13.14□□□□□ -0.31
COPS3-218ENST00000584216 SPATA16Q9BXB7 569 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 OR2AG1Q9H205 316 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 IGSF5Q9NSI5 407 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
COPS3-218ENST00000584216 UTP20O75691 2785 aaKnown RBP13.14□□□□□ -0.31
COPS3-218ENST00000584216 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 ARGFXA6NJG6 315 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 MATN3O15232 486 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 GZMAP12544 262 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 ZNF7P17097 686 aaPredicted RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
COPS3-218ENST00000584216 IDSP22304 550 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 DCTP40126 519 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 SLC19A1P41440 591 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 HALP42357 657 aa13.13□□□□□ -0.31
COPS3-218ENST00000584216 DSC2Q02487 901 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms