RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SEMA5AQ13591 1074 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 INSCQ1MX18 579 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 LDLRAP1Q5SW96 308 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 CERCAMQ5T4B2 595 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 GPRC6AQ5T6X5 926 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 LRRTM4Q86VH4 590 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 RASGEF1CQ8N431 466 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 DCBLD1Q8N8Z6 715 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 PRELID2Q8N945 189 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF398Q8TD17 642 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 DTX3LQ8TDB6 740 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 DNAJC1Q96KC8 554 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 DEPDC7Q96QD5 511 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 OSBPL9Q96SU4 736 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 NAP1L3Q99457 506 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 AP1M1Q9BXS5 423 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 ZCCHC2Q9C0B9 1178 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 OSGEPL1Q9H4B0 414 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 ASB8Q9H765 288 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 RNF215Q9Y6U7 377 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 CHD8Q9HCK8 2581 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 TRBV23OR9-2A0A075B6M9 112 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CCDC78A2IDD5 438 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 TRABD2BA6NFA1 517 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 RHPN2P1A8MT19 583 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 PGRMC1O00264 195 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CCL22O00626 93 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CHUKO15111 745 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 KMOO15229 486 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 LDB2O43679 373 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 NUDT21O43809 227 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CSO75390 466 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 RPLP0P05388 317 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 PROS1P07225 676 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 AKT1P31749 480 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 GNG11P61952 73 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CCL7P80098 99 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 BASP1P80723 227 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CDH17Q12864 832 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 SPIDRQ14159 915 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CDCP2Q5VXM1 449 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 RBM44Q6ZP01 1051 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CCNJLQ8IV13 435 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 NAGSQ8N159 534 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 ARL14Q8N4G2 192 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 DDHD1Q8NEL9 900 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 COG1Q8WTW3 980 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 ZCCHC14Q8WYQ9 949 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 KLC4Q9NSK0 619 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 SMOXQ9NWM0 555 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 CRLS1Q9UJA2 301 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 DNAJC16Q9Y2G8 782 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC30A1Q9Y6M5 507 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 ARHGEF17Q96PE2 2063 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 ACACBO00763 2458 aa12.44□□□□□ -0.42
SMARCE1-218ENST00000582955 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 MYLKQ15746 1914 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CASC3O15234 703 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 SUN1O94901 812 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 EML2O95834 649 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 MSH3P20585 1137 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 ITGALP20701 1170 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 MC4RP32245 332 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CA5AP35218 305 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 GRIA1P42261 906 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 VPS41P49754 854 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 TERF1P54274 439 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 XIAPP98170 497 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 NFATC2Q13469 925 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 TRIP13Q15645 432 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CCDC38Q502W7 563 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 TTC27Q6P3X3 843 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 DET1Q7L5Y6 550 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 C17orf82Q86X59 251 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 RASGEF1AQ8N9B8 481 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC37A2Q8TED4 501 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 STYXQ8WUJ0 223 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 LRRN3Q9H3W5 708 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 CCDC86Q9H6F5 360 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 NLE1Q9NVX2 485 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC23A2Q9UGH3 650 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 TTC7AQ9ULT0 858 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms