RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 RANBP9Q96S59 729 aa21.46■■□□□ 1.03
CDC42EP4-203ENST00000578516 TRIM39Q9HCM9 518 aa21.46■■□□□ 1.03
CDC42EP4-203ENST00000578516 VPS18Q9P253 973 aa21.46■■□□□ 1.03
CDC42EP4-203ENST00000578516 DOLKQ9UPQ8 538 aa21.46■■□□□ 1.03
CDC42EP4-203ENST00000578516 HEATR9A2RTY3 570 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 EML2O95834 649 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 FTH1P19P0C7X4 201 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 B4GALNT1Q00973 533 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 NFATC2Q13469 925 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 CHST15Q7LFX5 561 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 ZNF547Q8IVP9 402 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 FSTL5Q8N475 847 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 RASGEF1AQ8N9B8 481 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 DDHD1Q8NEL9 900 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 PPHLN1Q8NEY8 458 aaKnown RBP21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 HDAC10Q969S8 669 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 SERPINB12Q96P63 405 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 SPATS2LQ9NUQ6 558 aaKnown RBP21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 RNF14Q9UBS8 474 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 SLC23A2Q9UGH3 650 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 CRLS1Q9UJA2 301 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 CSNK1G3Q9Y6M4 447 aa21.45■■□□□ 1.02
CDC42EP4-203ENST00000578516 MED19A0JLT2 244 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 GRID2O43424 1007 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 RAD51CO43502 376 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 NUAK1O60285 661 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 PPFIA2O75334 1257 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 F7P08709 466 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 ADRA1DP25100 572 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 AKT1P31749 480 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 FOXN2P32314 431 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 ACADVLP49748 655 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 ITGA9Q13797 1035 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 SEMA3AQ14563 771 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 ELOCQ15369 112 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 C6orf132Q5T0Z8 1188 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 ZDHHC20Q5W0Z9 365 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 GUSBP11Q6P575 273 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 PPIL6Q8IXY8 311 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 BEND7Q8N7W2 519 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 GPBAR1Q8TDU6 330 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 BOCQ9BWV1 1114 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 SMOXQ9NWM0 555 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 GULP1Q9UBP9 304 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 CDC23Q9UJX2 597 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 GPR34Q9UPC5 381 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 SPEGQ15772 3267 aa21.44■■□□□ 1.02
CDC42EP4-203ENST00000578516 NEMP2A6NFY4 417 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 OR2AG2A6NM03 316 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 GOT2P00505 430 aaKnown RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 ITGALP20701 1170 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 PSMA3P25788 255 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 PBLDP30039 288 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 HADHAP40939 763 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 ACTR1BP42025 376 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 MAZP56270 477 aaKnown RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 ACTR1AP61163 376 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 DAB2P98082 770 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 CDK16Q00536 496 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 PDE1BQ01064 536 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 TMEM115Q12893 351 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 LDB1Q86U70 411 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 FAM46DQ8NEK8 389 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 CDC6Q99741 560 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 DPH5Q9H2P9 285 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 TRNAU1APQ9NX07 287 aaKnown RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 IL1RAPL1Q9NZN1 696 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 TAAR2Q9P1P5 351 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 MARCH4Q9P2E8 410 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 APPL1Q9UKG1 709 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 DNAJC16Q9Y2G8 782 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 SLC30A1Q9Y6M5 507 aa21.43■■□□□ 1.02
CDC42EP4-203ENST00000578516 H7C0S8 307 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 TNFSF14O43557 240 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 NOBOXO60393 691 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 CDK14O94921 469 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 ALPPL2P10696 532 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 RPL21P46778 160 aaKnown RBP21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 ILF3Q12906 894 aaKnown RBP eCLIP21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 DBN1Q16643 649 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 MSS51Q4VC12 460 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 PCID2Q5JVF3 399 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 FNBP1LQ5T0N5 605 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 ZCCHC8Q6NZY4 707 aaKnown RBP21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 TAS2R42Q7RTR8 314 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 SNX20Q7Z614 316 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 GLRX5Q86SX6 157 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 SERPINA9Q86WD7 417 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 GKN2Q86XP6 184 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 MARCH9Q86YJ5 346 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 TRAPPC5Q8IUR0 188 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 NXPE1Q8N323 547 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 MCUQ8NE86 351 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 MFSD3Q96ES6 412 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 TREX1Q9NSU2 369 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 BFARQ9NZS9 450 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 FAM8A1Q9UBU6 413 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 SNX24Q9Y343 169 aa21.42■■□□□ 1.02
CDC42EP4-203ENST00000578516 TRBV23OR9-2A0A075B6M9 112 aa21.41■■□□□ 1.02
CDC42EP4-203ENST00000578516 TRBV5-4A0A0C4DH59 114 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms