RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 C14orf28Q4W4Y0 310 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 EFHC1Q5JVL4 640 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 BRMS1LQ5PSV4 323 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 E4F1Q66K89 784 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SPECC1LQ69YQ0 1117 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 GALNT18Q6P9A2 607 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 BORAQ6PGQ7 559 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TRIM65Q6PJ69 517 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 ENPP7Q6UWV6 458 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SLC47A2Q86VL8 602 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NLRP14Q86W24 1093 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 XYLT1Q86Y38 959 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NRROSQ86YC3 692 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 UNC5BQ8IZJ1 945 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 FSTL5Q8N475 847 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 EMC1Q8N766 993 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 ZNF397Q8NF99 534 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SPATA20Q8TB22 786 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 CXorf40AQ8TE69 158 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SHC3Q92529 594 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SNX21Q969T3 373 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NT5C3BQ969T7 300 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RAB7BQ96AH8 199 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MIB2Q96AX9 1013 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 PGAP3Q96FM1 320 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 NSMCE3Q96MG7 304 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 CFAP57Q96MR6 1250 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MED15Q96RN5 788 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 RBM15Q96T37 977 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 CRACR2AQ9BSW2 395 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MCMBPQ9BTE3 642 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 APOOQ9BUR5 198 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 ZYG11BQ9C0D3 744 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TMEM168Q9H0V1 697 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 WDCPQ9H6R7 721 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 SIX2Q9NPC8 291 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 LHX3Q9UBR4 397 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 KLQ9UEF7 1012 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 DNAI1Q9UI46 699 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MAN1B1Q9UKM7 699 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 TMA7Q9Y2S6 64 aaKnown RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 B3GALT1Q9Y5Z6 326 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 OAS3Q9Y6K5 1087 aaKnown RBP3.96□□□□□ -1.78
PTPRM-206ENST00000578093 MED13Q9UHV7 2174 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.78
PTPRM-206ENST00000578093 CREBBPQ92793 2442 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PCSK5Q92824 1860 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TRBV23-1A0A0A0MS06 115 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 IGHV5-10-1A0A0J9YXX1 117 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 LOC101059948A0A1B0GTJ6 334 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TSPAN11A1L157 253 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FADS2P1A8MWK0 482 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 GOLGA8SH3BPF8 625 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 STMND1H3BQB6 276 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PSMA7O14818 248 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 NKX2-8O15522 239 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 MED7O43513 233 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 NPHS1O60500 1241 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 RAD1O60671 282 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FUCA1P04066 466 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 THBDP07204 575 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ALPIP09923 528 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CTSEP14091 401 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 AK4P27144 223 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CD82P27701 267 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 MMP12P39900 470 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 USP8P40818 1118 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 BLKP51451 505 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 MLLT10P55197 1068 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 KIAA1024LP59773 190 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SRP54P61011 504 aaKnown RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CCDC15Q0P6D6 951 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CDC20Q12834 499 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 LAPTM5Q13571 262 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CDO1Q16878 200 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 C15orf59Q2T9L4 293 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 MYLK3Q32MK0 819 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SLC25A52Q3SY17 297 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 AMZ1Q400G9 498 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TMEM52BQ4KMG9 183 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ACBD5Q5T8D3 534 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FAM102AQ5T9C2 384 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 NKAIN2Q5VXU1 208 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ANKS6Q68DC2 871 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 OGFOD2Q6N063 350 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 RETSATQ6NUM9 610 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 GDPD4Q6W3E5 623 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ZNF783Q6ZMS7 281 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CEP128Q6ZU80 1094 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TIPARPQ7Z3E1 657 aaKnown RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PHLDB2Q86SQ0 1253 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ATG4DQ86TL0 474 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ZSCAN30Q86W11 494 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 C17orf82Q86X59 251 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ZNF761Q86XN6 746 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 GKN2Q86XP6 184 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 IRF2BP1Q8IU81 584 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PPIL6Q8IXY8 311 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CACNA2D3Q8IZS8 1091 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms