RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	PLD2	O14939	933 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	CHUK	O15111	745 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	RRP8	O43159	456 aa	Known RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	MPST	P25325	297 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	RBMS1	P29558	406 aa	Known RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	ADRA1A	P35348	466 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	DEK	P35659	375 aa	Known RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	PCBP4	P57723	403 aa	Known RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	MPP3	Q13368	585 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	C16orf72	Q14CZ0	275 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	SOWAHC	Q53LP3	525 aa	Predicted RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	CCDC181	Q5TID7	509 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	RANBP10	Q6VN20	620 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	LRRC69	Q6ZNQ3	347 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	PEX26	Q7Z412	305 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	CLEC14A	Q86T13	490 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	ZNF547	Q8IVP9	402 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	FBXO39	Q8N4B4	442 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	ZNF248	Q8NDW4	579 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	CCDC110	Q8TBZ0	833 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	TMEM74	Q96NL1	305 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	APOL2	Q9BQE5	337 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	ZSCAN5A	Q9BUG6	496 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	GBA3	Q9H227	469 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	PRDM8	Q9NQV8	689 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	SCHIP1	Q9P0W5	487 aa	Predicted RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	AMFR	Q9UKV5	643 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	R3HDM2	Q9Y2K5	976 aa	Known RBP	14	□□□□□ -0.17
EDC4-210	ENST00000575507	SSUH2	Q9Y2M2	353 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	KCTD3	Q9Y597	815 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	RP1	P56715	2156 aa		14	□□□□□ -0.17
EDC4-210	ENST00000575507	CHD6	Q8TD26	2715 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	KNTC1	P50748	2209 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	IGHV5-10-1	A0A0J9YXX1	117 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	USP27X	A6NNY8	438 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	KCNN4	O15554	427 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	KIF5C	O60282	957 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	SNX2	O60749	519 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	CCL4	P13236	92 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	MSN	P26038	577 aa	Known RBP	13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	PSMB4	P28070	264 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	CSF2RB	P32927	897 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	KLF1	Q13351	362 aa	Predicted RBP	13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	SQSTM1	Q13501	440 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	CHRNA6	Q15825	494 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	ZNF569	Q5MCW4	686 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	DENND5A	Q6IQ26	1287 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	DARS2	Q6PI48	645 aa	Known RBP	13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	CRTC3	Q6UUV7	619 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	C11orf96	Q7Z7L8	435 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	PIM3	Q86V86	326 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	RCBTB1	Q8NDN9	531 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	BLOC1S5	Q8TDH9	187 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	PLEKHG4B	Q96PX9	1271 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	FICD	Q9BVA6	458 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	RMI1	Q9H9A7	625 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	THSD1	Q9NS62	852 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	RAD18	Q9NS91	495 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	KLC4	Q9NSK0	619 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	LOXL2	Q9Y4K0	774 aa		13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	DSP	P15924	2871 aa	Known RBP	13.99	□□□□□ -0.17
EDC4-210	ENST00000575507	URB1	O60287	2271 aa	Known RBP	13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	ITPR1	Q14643	2758 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	PRAMEF33	A0A0G2JMD5	474 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	KLK10	O43240	276 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	EFS	O43281	561 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	TJP3	O95049	919 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	CPNE6	O95741	557 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	ITGA2B	P08514	1039 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	HLA-DPA1	P20036	260 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	SLC5A2	P31639	672 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	GPR3	P46089	330 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	FASLG	P48023	281 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	TMEM115	Q12893	351 aa	Predicted RBP	13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	SPARCL1	Q14515	664 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	PLA2G4E	Q3MJ16	856 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	PHF19	Q5T6S3	580 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	PDPK2P	Q6A1A2	396 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	NAT14	Q8WUY8	206 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	HES6	Q96HZ4	224 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	VPS35	Q96QK1	796 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	SRPK1	Q96SB4	655 aa	Known RBP	13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	TRABD	Q9H4I3	376 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	CPNE5	Q9HCH3	593 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	PISD	Q9UG56	409 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	ARL5A	Q9Y689	179 aa		13.98	□□□□□ -0.17
EDC4-210	ENST00000575507	TMX2-CTNND1	H3BSU7	103 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	CDK14	O94921	469 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	METTL18	O95568	372 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	F3	P13726	295 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	BRAF	P15056	766 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	ZNF7	P17097	686 aa	Predicted RBP	13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	ARSD	P51689	593 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	CLCNKA	P51800	687 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	LIMK2	P53671	638 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	GEM	P55040	296 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	GDF10	P55107	478 aa		13.97	□□□□□ -0.17
EDC4-210	ENST00000575507	HHEX	Q03014	270 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms