RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ARF4P18085 180 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 PSMB9P28065 219 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ADRA1BP35368 520 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 HMGCS2P54868 508 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PLIN5Q00G26 463 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 TNFAIP2Q03169 654 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 FSCN1Q16658 493 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ARHGAP36Q6ZRI8 547 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 P2RY8Q86VZ1 359 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 DTWD1Q8N5C7 304 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ITFG1Q8TB96 612 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 MCOLN3Q8TDD5 553 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 TP53INP1Q96A56 240 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 FDXACB1Q9BRP7 624 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 TRMOQ9BU70 441 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ASPSCR1Q9BZE9 553 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SLIRPQ9GZT3 109 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 CARS2Q9HA77 564 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 NECTIN3Q9NQS3 549 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 IL37Q9NZH6 218 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 EVPLQ92817 2033 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 CCDC154A6NI56 674 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 HOXC11O43248 304 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 MGEA5O60502 916 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PMPCBO75439 489 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 GTF2E2P29084 291 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 ISL1P61371 349 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 HERVK_113P63132 956 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SELPLGQ14242 412 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SULT1C3Q6IMI6 304 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 DENND5AQ6IQ26 1287 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SPATC1Q76KD6 591 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 BEND5Q7L4P6 421 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ISCA2Q86U28 154 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 HEATR4Q86WZ0 1026 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PROSER1Q86XN7 944 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 CCDC103Q8IW40 242 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PTGR2Q8N8N7 351 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 PHF10Q8WUB8 498 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 ATL1Q8WXF7 558 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PTERQ96BW5 349 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 NPY6RQ99463 290 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 ERVK-6Q9BXR3 956 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 MRM3Q9HC36 420 aaKnown RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 PRMT7Q9NVM4 692 aaPredicted RBP14.31□□□□□ -0.12
SMG6-215ENST00000574501 GPR45Q9Y5Y3 372 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 LOC100130705A0A1B0GUX0 176 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 IDH3BO43837 385 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 HS6ST1O60243 411 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 RAP2AP10114 183 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 TRPC1P48995 793 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CDKN2DP55273 166 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 EEFSECP57772 596 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 MTPNP58546 118 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 HECTD2Q5U5R9 776 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 SPESP1Q6UW49 350 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 LINC00299Q6ZSB3 139 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 PSD4Q8NDX1 1056 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 OR7G1Q8NGA0 311 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 FBXO30Q8TB52 745 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 WNT8BQ93098 351 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 L3HYPDHQ96EM0 354 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 ZNF419Q96HQ0 510 aaPredicted RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 FAM167AQ96KS9 214 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 ZNF300Q96RE9 604 aaPredicted RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 OSBPL10Q9BXB5 764 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 INTS6Q9UL03 887 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 CLDN5O00501 218 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CCL22O00626 93 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 GNGT2O14610 69 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 NCAM2O15394 837 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CCNKO75909 580 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 BEST1O76090 585 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 PRSS23O95084 383 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CST1P01037 141 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 SLC4A1P02730 911 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 HTR1EP28566 365 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 FMO3P31513 532 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 ZFP36L2P47974 494 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 RACK1P63244 317 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 IL5RAQ01344 420 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CHRNB3Q05901 458 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 PFKFB4Q16877 469 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 PLA2G4EQ3MJ16 856 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 FAM98BQ52LJ0 330 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 ENPP6Q6UWR7 440 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 PLD3Q8IV08 490 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 NUDT8Q8WV74 236 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 C18orf25Q96B23 403 aaPredicted RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 PPM1MQ96MI6 270 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 CDK5RAP1Q96SZ6 601 aaKnown RBP14.3□□□□□ -0.12
SMG6-215ENST00000574501 RHNO1Q9BSD3 238 aa14.3□□□□□ -0.12
SMG6-215ENST00000574501 FBXO10Q9UK96 956 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms