RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GPR89AB7ZAQ6 455 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 F5H423 210 aaPredicted RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 ATXN7O15265 892 aaPredicted RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 SLC4A1P02730 911 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 GPR89BP0CG08 455 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 THRAP10827 490 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 CCL4P13236 92 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 ADRA1AP35348 466 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 VAV2P52735 878 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 UCNP55089 124 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 UBE2IP63279 158 aaKnown RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 CXADRP78310 365 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 MSLNQ13421 630 aaPredicted RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 MAP9Q49MG5 647 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 PID1Q7Z2X4 250 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 C11orf96Q7Z7L8 435 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 CCDC50Q8IVM0 306 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 RCBTB1Q8NDN9 531 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 OR4D9Q8NGE8 314 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 PMEPA1Q969W9 287 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 CCDC74BQ96LY2 380 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 VPS35Q96QK1 796 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 SRPK1Q96SB4 655 aaKnown RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 OSBPL8Q9BZF1 889 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 TRABDQ9H4I3 376 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 FOXJ2Q9P0K8 574 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 SCHIP1Q9P0W5 487 aaPredicted RBP17.21■□□□□ 0.35
SMG6-214ENST00000573827 TRHDEQ9UKU6 1024 aa17.21■□□□□ 0.35
SMG6-214ENST00000573827 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMG6-214ENST00000573827 SDK2Q58EX2 2172 aa17.21■□□□□ 0.34
SMG6-214ENST00000573827 PRAMEF33A0A0G2JMD5 474 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 TEX51A0A1B0GUA7 166 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
SMG6-214ENST00000573827 PRAMEF10O60809 474 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 MTX2O75431 263 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 C1QL1O75973 258 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 SLC25A14O95258 325 aaPredicted RBP17.2■□□□□ 0.34
SMG6-214ENST00000573827 PYGMP11217 842 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 F3P13726 295 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 TMPRSS3P57727 454 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 OTUD4Q01804 1114 aaKnown RBP17.2■□□□□ 0.34
SMG6-214ENST00000573827 MPP3Q13368 585 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 TGIF1Q15583 401 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 PHF19Q5T6S3 580 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 DTX1Q86Y01 620 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 CMKLR1Q99788 373 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 B3GNT4Q9C0J1 378 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 GBA3Q9H227 469 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 BPIFA1Q9NP55 256 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 PRDM8Q9NQV8 689 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 TENM4Q6N022 2769 aa17.2■□□□□ 0.34
SMG6-214ENST00000573827 CCDC66A2RUB6 948 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 K7ENP7 123 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 AGRPO00253 132 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 GPR39O43194 453 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 JMJD7P0C870 316 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
SMG6-214ENST00000573827 HLA-DPA1P20036 260 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 GPLD1P80108 840 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 SRSF6Q13247 344 aaKnown RBP17.19■□□□□ 0.34
SMG6-214ENST00000573827 TRA2AQ13595 282 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMG6-214ENST00000573827 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
SMG6-214ENST00000573827 INO80CQ6PI98 192 aaPredicted RBP17.19■□□□□ 0.34
SMG6-214ENST00000573827 RANBP10Q6VN20 620 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 PHYKPLQ8IUZ5 450 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 SLC25A41Q8N5S1 370 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 IPMKQ8NFU5 416 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 USP7Q93009 1102 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 CCDC97Q96F63 343 aaPredicted RBP17.19■□□□□ 0.34
SMG6-214ENST00000573827 FAM118BQ9BPY3 351 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 KLC4Q9NSK0 619 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 KCNK4Q9NYG8 393 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
SMG6-214ENST00000573827 KIR2DS5A0A0G2JLQ3 304 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 A0A0G2JNG1 304 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.18■□□□□ 0.34
SMG6-214ENST00000573827 KIR2DS3K7RE56 304 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 AGTP01019 485 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 BRAFP15056 766 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 MPSTP25325 297 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 RWDD2BP57060 319 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 HHEXQ03014 270 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 VAC14Q08AM6 782 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 OLIG2Q13516 323 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 KIR2DS5Q14953 304 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 ARHGAP40Q5TG30 622 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 CCDC70Q6NSX1 233 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 TMEM71Q6P5X7 295 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 CRTC3Q6UUV7 619 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 BMPERQ8N8U9 685 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 LSM14AQ8ND56 463 aaKnown RBP17.18■□□□□ 0.34
SMG6-214ENST00000573827 TTC9Q92623 222 aa17.18■□□□□ 0.34
SMG6-214ENST00000573827 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
SMG6-214ENST00000573827 TIMM29Q9BSF4 260 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms