RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 LVRNQ6Q4G3 990 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 UNQ6494/PRO21346Q6UXR6 183 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 CCNI2Q6ZMN8 369 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 GKN2Q86XP6 184 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 NAT8LQ8N9F0 302 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 BBOF1Q8ND07 529 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ZNF398Q8TD17 642 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 SCG3Q8WXD2 468 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 GATA6Q92908 595 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 GLMNQ92990 594 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ULK4Q96C45 1275 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 SNF8Q96H20 258 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ZCCHC2Q9C0B9 1178 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 CARS2Q9HA77 564 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 SMOXQ9NWM0 555 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 CNOT6Q9ULM6 557 aaKnown RBP13.4□□□□□ -0.26
RPAIN-213ENST00000573577 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 MRFAP1Q9Y605 127 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 ACACBO00763 2458 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 LRP4O75096 1905 aa13.4□□□□□ -0.26
RPAIN-213ENST00000573577 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.27
RPAIN-213ENST00000573577 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TMEM63AO94886 807 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 GP1BAP07359 652 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 PSMA3P25788 255 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 RPIAP49247 311 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 NFATC2Q13469 925 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 PEX6Q13608 980 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 PTPRCAPQ14761 206 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 NR0B2Q15466 257 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 KCTD19Q17RG1 926 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-213ENST00000573577 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 IZUMO3Q5VZ72 239 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 SLC35F3Q8IY50 421 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.39□□□□□ -0.274e-10■■■■■ 86.3
RPAIN-213ENST00000573577 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TTC25Q96NG3 672 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TRIM51Q9BSJ1 452 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 ASB8Q9H765 288 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 MRM3Q9HC36 420 aaKnown RBP13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TRIM39Q9HCM9 518 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 SUFUQ9UMX1 484 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 TMEM98Q9Y2Y6 226 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
RPAIN-213ENST00000573577 FRYQ5TBA9 3013 aa13.39□□□□□ -0.27
RPAIN-213ENST00000573577 MAGEB16A2A368 324 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 SDR42E2A6NKP2 422 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 GOLGA8MH3BSY2 632 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 GAPDHSO14556 408 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-213ENST00000573577 RAD51CO43502 376 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 VEGFDO43915 354 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 FUCA1P04066 466 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 RALBP11234 206 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 IVDP26440 423 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 MGAT1P26572 445 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 MC4RP32245 332 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 GNPDA1P46926 289 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 POLD2P49005 469 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CLDN6P56747 220 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 PRAMEP78395 509 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 XIAPP98170 497 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 E2F1Q01094 437 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CACNG1Q06432 222 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■□□□ 12.4
RPAIN-213ENST00000573577 CALCOCO2Q13137 446 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
RPAIN-213ENST00000573577 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 AFTPHQ6ULP2 937 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
RPAIN-213ENST00000573577 GALNT13Q8IUC8 556 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
RPAIN-213ENST00000573577 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms