RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 PPP4R4Q6NUP7 873 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 FUT10Q6P4F1 479 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CPNE9Q8IYJ1 553 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CDYL2Q8N8U2 506 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ANKFN1Q8N957 763 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 OR52B6Q8NGF0 335 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 DDI1Q8WTU0 396 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 LINGO1Q96FE5 620 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ALG2Q9H553 416 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 GKN1Q9NS71 199 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 PCTPQ9UKL6 214 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 AGO1Q9UL18 857 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 USP22Q9UPT9 525 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 OAS3Q9Y6K5 1087 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RNF103-CHMP3A0A140T963 221 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 A0A1W2PP18 115 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ADAM12O43184 909 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CA12O43570 354 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ESRRBO95718 433 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CLIC3O95833 236 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 KLKB1P03952 638 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ALDH2P05091 517 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 PYGLP06737 847 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CDH2P19022 906 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CR2P20023 1033 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 SLC11A1P49279 550 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 SLC11A2P49281 568 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RCAN2Q14206 197 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 INPP5AQ14642 412 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CTSL3PQ5NE16 218 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 PRMT9Q6P2P2 845 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CMTR2Q8IYT2 770 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 GLT1D1Q96MS3 346 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ANKRD60Q9BZ19 345 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 PNPLA3Q9NST1 481 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 SMOXQ9NWM0 555 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CD274Q9NZQ7 290 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ACTR3BQ9P1U1 418 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 DNMT3LQ9UJW3 386 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RIMKLBQ9ULI2 386 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 PCDHA9Q9Y5H5 950 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 GREB1Q4ZG55 1949 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 AQP12BA6NM10 295 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 SLC38A8A6NNN8 435 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 H3BNH8 94 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 DLGAP1O14490 977 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 GIPC1O14908 333 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 SNX2O60749 519 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 VPS26AO75436 327 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 OR4F21O95013 312 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 RHOCP08134 193 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 IRF1P10914 325 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 PKMP14618 531 aaKnown RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 LPOP22079 712 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 IL10P22301 178 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 SLC5A2P31639 672 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 GSK3BP49841 420 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 RNF180Q86T96 592 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 AQP12AQ8IXF9 295 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 KIAA2013Q8IYS2 634 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CD200R1Q8TD46 325 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TFAP2CQ92754 450 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.12□□□□□ -0.634e-10■■■■■ 86.3
RPAIN-212ENST00000573126 ZUFSPQ96AP4 578 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TRIM15Q9C019 465 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 AGPAT4Q9NRZ5 378 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 INTS7Q9NVH2 962 aaKnown RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 HACD3Q9P035 362 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 E5RI56 91 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 KDELR3O43731 214 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CHEK2O96017 543 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 ZFP36L2P47974 494 aaKnown RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 KPNA1P52294 538 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CDH4P55283 916 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 IL2P60568 153 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TWF1Q12792 350 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 BNIP2Q12982 314 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 LCN8Q6JVE9 175 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TAS2R42Q7RTR8 314 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 GPSM1Q86YR5 675 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 ADGRG5Q8IZF4 528 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 NKAPQ8N5F7 415 aaKnown RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 NUDT8Q8WV74 236 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 TMEM125Q96AQ2 219 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 PLEKHG4BQ96PX9 1271 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms