RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 CEP104O60308 925 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A9O60656 530 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 MTX2O75431 263 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 FGGP02679 453 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 RPLP0P05388 317 aaKnown RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 ACP5P13686 325 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A6P19224 532 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A1P22309 533 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A4P22310 534 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 CXCR5P32302 372 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A3P35503 534 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A5P35504 534 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 CLCNKAP51800 687 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 CCL7P80098 99 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 B4GALNT1Q00973 533 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 TMEM115Q12893 351 aaPredicted RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 NR1D2Q14995 579 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 SPRED1Q7Z699 444 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 TAB3Q8N5C8 712 aaPredicted RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 DDHD1Q8NEL9 900 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 OR4K2Q8NGD2 314 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 GDAP1Q8TB36 358 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF398Q8TD17 642 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 GFM1Q96RP9 751 aaKnown RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 KCNF1Q9H3M0 494 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A7Q9HAW7 530 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A10Q9HAW8 530 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 UGT1A8Q9HAW9 530 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 KCTD3Q9Y597 815 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
TVP23B-204ENST00000571018 TPRP12270 2363 aaKnown RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 SPEGQ15772 3267 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 A6NCN8 305 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 AGAP14A8MT82 685 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 KMOO15229 486 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 PPM1DO15297 605 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 GPR39O43194 453 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 B4GAT1O43505 415 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 LDB2O43679 373 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
TVP23B-204ENST00000571018 PRAMEF1O95521 474 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 EML2O95834 649 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 IFNB1P01574 187 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 CA5AP35218 305 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ACTN2P35609 894 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 FDFT1P37268 417 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 HADHAP40939 763 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 GPR3P46089 330 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 FASLGP48023 281 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF140P52738 457 aaPredicted RBP12.5□□□□□ -0.41
TVP23B-204ENST00000571018 PDX1P52945 283 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 XIAPP98170 497 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 LDLRAP1Q5SW96 308 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 IYDQ6PHW0 289 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 CRTC3Q6UUV7 619 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 LINC00523Q86TU6 105 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 LRRTM4Q86VH4 590 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF547Q8IVP9 402 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 Q8N9G6 341 aaPredicted RBP12.5□□□□□ -0.41
TVP23B-204ENST00000571018 OR13C4Q8NGS5 318 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 TTC25Q96NG3 672 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 SYNDIG1Q9H7V2 258 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 PAK5Q9P286 719 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 SLC23A2Q9UGH3 650 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 MYLKQ15746 1914 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ACACBO00763 2458 aa12.5□□□□□ -0.41
TVP23B-204ENST00000571018 ASXL3Q9C0F0 2248 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 PRR19A6NJB7 356 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-204ENST00000571018 D6RAR5 112 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ZW10O43264 779 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 SUN1O94901 812 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 F3P13726 295 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ETS1P14921 441 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF7P17097 686 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-204ENST00000571018 TPH1P17752 444 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 LSSP48449 732 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 BIRC2Q13490 618 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 SEMA5AQ13591 1074 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 GTF2H3Q13889 308 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 INSCQ1MX18 579 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms