RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	MAGEA3	P43357	314 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CDKN1C	P49918	316 aa	Predicted RBP	11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PRAME	P78395	509 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ACVR1	Q04771	509 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CACNG1	Q06432	222 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CALCOCO2	Q13137	446 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GTF2H3	Q13889	308 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DEFB133	Q30KQ1	61 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GPR33	Q49SQ1	333 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PYCR3	Q53H96	274 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GPRC6A	Q5T6X5	926 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DUPD1	Q68J44	220 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PSAPL1	Q6NUJ1	521 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	AFTPH	Q6ULP2	937 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CES3	Q6UWW8	571 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DBX2	Q6ZNG2	339 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TAS2R42	Q7RTR8	314 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PIP4P1	Q86T03	277 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GALNT13	Q8IUC8	556 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	FSTL5	Q8N475	847 aa	Predicted RBP	11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	MMGT1	Q8N4V1	131 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CEP112	Q8N8E3	955 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	BBOF1	Q8ND07	529 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	OR6P1	Q8NGX9	317 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	RHBDD1	Q8TEB9	315 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PEX13	Q92968	403 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	HDAC10	Q969S8	669 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SCARF2	Q96GP6	870 aa	Predicted RBP	11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TTC25	Q96NG3	672 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CAMK1G	Q96NX5	476 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	OR2M4	Q96R27	311 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	RTKN	Q9BST9	563 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	LRRC1	Q9BTT6	524 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	KIFC1	Q9BW19	673 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CLPB	Q9H078	707 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TMEM168	Q9H0V1	697 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	RMI1	Q9H9A7	625 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TREX1	Q9NSU2	369 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	WHRN	Q9P202	907 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ZNHIT2	Q9UHR6	403 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DOLK	Q9UPQ8	538 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PRKAB1	Q9Y478	270 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	MAD1L1	Q9Y6D9	718 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CSNK1G3	Q9Y6M4	447 aa		11.44	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SPEG	Q15772	3267 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TRBV5-4	A0A0C4DH59	114 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	AGAP14	A8MT82	685 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ESPN	B1AK53	854 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GPR89A	B7ZAQ6	455 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TM4SF5	O14894	197 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GRID2	O43424	1007 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	VEGFD	O43915	354 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	NUAK1	O60285	661 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ZNF500	O60304	480 aa	Predicted RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	BANF1	O75531	89 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CDK14	O94921	469 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GOT2	P00505	430 aa	Known RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ANXA6	P08133	673 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GPR89B	P0CG08	455 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PRSS56	P0CW18	603 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ALPPL2	P10696	532 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	MSH3	P20585	1137 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	FOXN2	P32314	431 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SLC7A5	Q01650	507 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DHX9	Q08211	1270 aa	Known RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TMEM115	Q12893	351 aa	Predicted RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PLA2G4E	Q3MJ16	856 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	BBS9	Q3SYG4	887 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DNAJC21	Q5F1R6	531 aa	Known RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	FNBP1L	Q5T0N5	605 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	ARMC3	Q5W041	872 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CRTC3	Q6UUV7	619 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CHST15	Q7LFX5	561 aa	Predicted RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	GKN2	Q86XP6	184 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	AGGF1	Q8N302	714 aa	eCLIP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	NXPE1	Q8N323	547 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	NOA1	Q8NC60	698 aa	Known RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	DEFB124	Q8NES8	71 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	OR4L1	Q8NH43	312 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	OR4C6	Q8NH72	309 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CCL4L1	Q8NHW4	92 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	MFSD3	Q96ES6	412 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	STAMBPL1	Q96FJ0	436 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SIGLEC10	Q96LC7	697 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PWWP2A	Q96N64	755 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TRIM56	Q9BRZ2	755 aa	Known RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	CARD6	Q9BX69	1037 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SLC32A1	Q9H598	525 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	NLGN3	Q9NZ94	848 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PCOLCE2	Q9UKZ9	415 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PLEKHM1	Q9Y4G2	1056 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	SPTBN2	O15020	2390 aa		11.43	□□□□□ -0.58
ATP2A3-208	ENST00000570845	FAM237B	A0A1B0GVD1	139 aa		11.42	□□□□□ -0.58
ATP2A3-208	ENST00000570845	MAGEB16	A2A368	324 aa		11.42	□□□□□ -0.58
ATP2A3-208	ENST00000570845	LMO7DN	F2Z398	122 aa		11.42	□□□□□ -0.58
ATP2A3-208	ENST00000570845	TRIM38	O00635	465 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms