RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	OR2AG1	Q9H205	316 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	CARD9	Q9H257	536 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	ZNF768	Q9H5H4	540 aa	Known RBP	10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	SLC23A2	Q9UGH3	650 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	DNPEP	Q9ULA0	475 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	PADI1	Q9ULC6	663 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	SCIN	Q9Y6U3	715 aa		10.85	□□□□□ -0.67
CMC2-223	ENST00000570195	LRRC53	A6NM62	1247 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	PDZK1P1	A8MUH7	402 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	MFSD11	O43934	449 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	FGF5	P12034	268 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	XRCC1	P18887	633 aa	Predicted RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	CDK11B	P21127	795 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	GARS	P41250	739 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	RPS18	P62269	152 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	NIPAL4	Q0D2K0	466 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	MMRN1	Q13201	1228 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	SEMA5A	Q13591	1074 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	INSC	Q1MX18	579 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	TDRD12	Q587J7	1177 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ANKRD20A8P	Q5CZ79	823 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	CACHD1	Q5VU97	1274 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ALS2CL	Q60I27	953 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	CPZ	Q66K79	652 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	FAM92B	Q6ZTR7	304 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	PPP1R3B	Q86XI6	285 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	APLF	Q8IW19	511 aa	Predicted RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	AOPEP	Q8N6M6	819 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ARRDC2	Q8TBH0	407 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ACTL8	Q9H568	366 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	HAUS4	Q9H6D7	363 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	UCK1	Q9HA47	277 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	PCDH9	Q9HC56	1237 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	LHX9	Q9NQ69	397 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.84	□□□□□ -0.67	2e-7	■■□□□ 12.7
CMC2-223	ENST00000570195	DTL	Q9NZJ0	730 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	PKD2L2	Q9NZM6	624 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	DNAJC16	Q9Y2G8	782 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	ADGRG1	Q9Y653	693 aa		10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-223	ENST00000570195	GOLGA6L3	A6NEY3	463 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	DDX3X	O00571	662 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	1e-13	■■■■□ 22.9
CMC2-223	ENST00000570195	TOX3	O15405	576 aa	Predicted RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	MTA2	O94776	668 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	MT-ND3	P03897	115 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	HLA-DQB2	P05538	268 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	CD48	P09326	243 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	CA4	P22748	312 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	ZNF165	P49910	485 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	CLCNKA	P51800	687 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	KRT81	Q14533	505 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	ASIC2	Q16515	512 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	QPCT	Q16769	361 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	E4F1	Q66K89	784 aa	Predicted RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	ALG1L	Q6GMV1	187 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	IRGC	Q6NXR0	463 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	APTX	Q7Z2E3	356 aa	Known RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	PRSS42	Q7Z5A4	293 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	ADGRG6	Q86SQ4	1221 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	RAVER1	Q8IY67	606 aa	Known RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	CCHCR1	Q8TD31	782 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	KLHL6	Q8WZ60	621 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	MAML1	Q92585	1016 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	BTBD6	Q96KE9	485 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	LYSMD1	Q96S90	227 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	SLC25A23	Q9BV35	468 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	SPATA16	Q9BXB7	569 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	BRD8	Q9H0E9	1235 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	MRPL47	Q9HD33	250 aa	Known RBP	10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	LUZP4	Q9P127	313 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	TRIM10	Q9UDY6	481 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	MAP4K5	Q9Y4K4	846 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	PCDHGA6	Q9Y5G7	932 aa		10.83	□□□□□ -0.68
CMC2-223	ENST00000570195	ESPL1	Q14674	2120 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	CACNA1D	Q01668	2161 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	LRRC10B	A6NIK2	292 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	ARGFX	A6NJG6	315 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	OR52A4P	A6NMU1	304 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	C21orf140	B9A014	251 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	MATN3	O15232	486 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	MTX2	O75431	263 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	SLC25A14	O95258	325 aa	Predicted RBP	10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	RECK	O95980	971 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	SLC4A1	P02730	911 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	GZMA	P12544	262 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	BRAF	P15056	766 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	CES1	P23141	567 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	IL4R	P24394	825 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	RPL10	P27635	214 aa	Known RBP	10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	COL8A1	P27658	744 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	CAPZB	P47756	277 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	CCL11	P51671	97 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	PGD	P52209	483 aa		10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	DRG2	P55039	364 aa	Known RBP	10.82	□□□□□ -0.68
CMC2-223	ENST00000570195	RPL26	P61254	145 aa	Known RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms