RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SLC8A2Q9UPR5 921 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 NEU3Q9UQ49 428 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 TRPV2Q9Y5S1 764 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 HTTP42858 3142 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 GOLGA4Q13439 2230 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MYO1GB0I1T2 1018 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 LDB2O43679 373 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 HS6ST1O60243 411 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC22A3O75751 556 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CAPN1P07384 714 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TPP2P29144 1249 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 AIF1P55008 147 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MLLT6P55198 1093 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SH3BGRP55822 239 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 RAD51Q06609 339 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 GTF2H3Q13889 308 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 PSAPL1Q6NUJ1 521 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CNTN4Q8IWV2 1026 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 PIANPQ8IYJ0 282 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC22A15Q8IZD6 547 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 LZTR1Q8N653 840 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CLDN19Q8N6F1 224 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 PSD4Q8NDX1 1056 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 OR2T11Q8NH01 316 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 IMP4Q96G21 291 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 C9orf16Q9BUW7 83 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TDRD1Q9BXT4 1180 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 VPS45Q9NRW7 570 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SMPD3Q9NY59 655 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SELENONQ9NZV5 590 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 IFT80Q9P2H3 777 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TRMT6Q9UJA5 497 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 RBMX2Q9Y388 322 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ARVCFO00192 962 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 AP1G1O43747 822 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 G6PDP11413 515 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 GKP32189 559 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 POLR2IP36954 125 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 HSPA7P48741 367 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 POLR2JP52435 117 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 C21orf59P57076 290 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 DNAJB13P59910 316 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MEP1AQ16819 746 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 LRRC73Q5JTD7 316 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM171A1Q5VUB5 890 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ABRAXAS1Q6UWZ7 409 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MBOAT1Q6ZNC8 495 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 GCNT7Q6ZNI0 430 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 OR10A6Q8NH74 314 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ITFG1Q8TB96 612 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM162AQ96A26 154 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 BIRC7Q96CA5 298 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 POLR1EQ9GZS1 481 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TAS2R13Q9NYV9 303 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 DOCK3Q8IZD9 2030 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MMP2P08253 660 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SERPINF2P08697 491 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MTHFD2P13995 350 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 HMOX2P30519 316 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 MC4RP32245 332 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 SHMT2P34897 504 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CASP9P55211 416 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TXNL4AP83876 142 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CD300CQ08708 224 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TSTA3Q13630 321 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CTXN3Q4LDR2 81 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ACBD5Q5T8D3 534 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ENPP6Q6UWR7 440 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ERI1Q8IV48 349 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 KIAA2013Q8IYS2 634 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CENPNQ96H22 339 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 UBXN10Q96LJ8 280 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 ACBD6Q9BR61 282 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 LATS2Q9NRM7 1088 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 GKN1Q9NS71 199 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CCM2LQ9NUG4 571 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TBC1D23Q9NUY8 699 aa8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 POLR3BQ9NW08 1133 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 TRNAU1APQ9NX07 287 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 CHCHD3Q9NX63 227 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 PNMA8BQ9ULN7 279 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-206ENST00000568294 H3BMQ9 156 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 DFNA5O60443 496 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 TCF3P15923 654 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 AGXTP21549 392 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 MATN1P21941 496 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 IL12AP29459 219 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ADSLP30566 484 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 MTHFRP42898 656 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 EMP3P54852 163 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 PURAQ00577 322 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 CDC42EP1Q00587 391 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 LCP2Q13094 533 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 NR1D2Q14995 579 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 NANOGP8Q6NSW7 305 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms