RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ALPK1Q96QP1 1244 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 VAT1Q99536 393 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 COLEC11Q9BWP8 271 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 EIF2B3Q9NR50 452 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 OLA1Q9NTK5 396 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 PCDHGA8Q9Y5G5 932 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 LOC100130705A0A1B0GUX0 176 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 H0YJX3 145 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 OR4F21O95013 312 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 NPR3P17342 541 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 ALDH3A2P51648 485 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 MXD1Q05195 221 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 TOP3AQ13472 1001 aaPredicted RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 TSNQ15631 228 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 RPL3LQ92901 407 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 BHMTQ93088 406 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 ITPKCQ96DU7 683 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 RTP4Q96DX8 246 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 TMEM246Q9BRR3 403 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 BCO2Q9BYV7 579 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 NANOGQ9H9S0 305 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 TAS2R13Q9NYV9 303 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 VPS4AQ9UN37 437 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 PLCH1Q4KWH8 1693 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ZSCAN5BA6NJL1 495 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TBKBP1A7MCY6 615 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 HNRNPCL2B2RXH8 293 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MSI1O43347 362 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 GAS2O43903 313 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 CD4P01730 458 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PIGRP01833 764 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MSH3P20585 1137 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 EFNA1P20827 205 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 SHMT2P34897 504 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GLUD2P49448 558 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 DGKEP52429 567 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CD83Q01151 205 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CD47Q08722 323 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 INTS11Q5TA45 600 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 CCBE1Q6UXH8 406 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 ZNF621Q6ZSS3 439 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 SZRD1Q7Z422 152 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 NECAB2Q7Z6G3 386 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 SLC44A2Q8IWA5 706 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 SPARTQ8N0X7 666 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TAGAPQ8N103 731 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PIK3C3Q8NEB9 887 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 EXOC2Q96KP1 924 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TRMOQ9BU70 441 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PRKD2Q9BZL6 878 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 KAT8Q9H7Z6 458 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 SYTL2Q9HCH5 934 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ADPRHL2Q9NX46 363 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MAGEL2Q9UJ55 1249 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 KCTD3Q9Y597 815 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ARVCFO00192 962 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CPNE3O75131 537 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 F9P00740 461 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CNPP09543 421 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 CYP2B6P20813 491 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 IMPDH1P20839 514 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 DCKP27707 260 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 FOXA1P55317 472 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PTPRNQ16849 979 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 AP5B1Q2VPB7 878 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PLA2G4EQ3MJ16 856 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CACHD1Q5VU97 1274 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PTRHD1Q6GMV3 140 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 SULT1C3Q6IMI6 304 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PROSER1Q86XN7 944 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ADGRG5Q8IZF4 528 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 OR56A4Q8NGH8 313 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 OTULINQ96BN8 352 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 LGALS12Q96DT0 336 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 B3GALT6Q96L58 329 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 RBM4BQ9BQ04 359 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 MLPHQ9BV36 600 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 RBM4Q9BWF3 364 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 MRIQ9BWK5 157 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 OSBPL10Q9BXB5 764 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 NXF3Q9H4D5 531 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 BPIFA1Q9NP55 256 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ABCB9Q9NP78 766 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PDP1Q9P0J1 537 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 TBC1D30Q9Y2I9 924 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 SPEF1Q9Y4P9 236 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 DNAJC15Q9Y5T4 150 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 COL4A1P02462 1669 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 BCORQ6W2J9 1755 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CCDC162PA2VCL2 907 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 LZTS3O60299 673 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 RFPL2O75678 378 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CNTN5O94779 1100 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms