RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 NRP2O60462 931 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TIPRLO75663 272 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 C9P02748 559 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 DBIP07108 87 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SMARCB1Q12824 385 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TEX44Q53QW1 395 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 KAT2AQ92830 837 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 FEM1CQ96JP0 617 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 DHRS7Q9Y394 339 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 HCN1O60741 890 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 KCNA10Q16322 511 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 CXorf57Q6NSI4 855 aaKnown RBP13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 ART5Q96L15 291 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 A0A1W2PRG6 482 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 IRGMA1A4Y4 181 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 E9PAM4 449 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 SCAMP1O15126 338 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 SIN3BO75182 1162 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 MMP3P08254 477 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 KIR3DL1P43629 444 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 SMU1Q2TAY7 513 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 ULK3Q6PHR2 472 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 STRADAQ7RTN6 431 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 PACS2Q86VP3 889 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 CERS5Q8N5B7 392 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 TIMM22Q9Y584 194 aa13.52□□□□□ -0.24
CX3CL1-204ENST00000565912 C5orf60A6NFR6 353 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 ZNF879B4DU55 563 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 SELPP16109 830 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 TACR2P21452 398 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 RPL5P46777 297 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 RAB25P57735 213 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 FAR1Q8WVX9 515 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 TPK1Q9H3S4 243 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 MTRRQ9UBK8 725 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 PRPF19Q9UMS4 504 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 CAMTA1Q9Y6Y1 1673 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 RCCD1A6NED2 376 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 PRR5-ARHGAP8B1AHC4 643 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 NOS1APO75052 506 aaPredicted RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 RSL1D1O76021 490 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 FAUP35544 74 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 GPD2P43304 727 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 POLR2JP52435 117 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 ERVK-21P61565 698 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 ARHGAP8P85298 464 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.52□□□□□ -0.257e-6■□□□□ 8.2
CX3CL1-204ENST00000565912 SPPL2CQ8IUH8 684 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 CSPG4P5Q96PW8 444 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 HOPXQ9BPY8 73 aaPredicted RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 CLDN4O14493 209 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 C5orf22Q49AR2 442 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 VSTM1Q6UX27 236 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 LDB1Q86U70 411 aaPredicted RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 CPSF7Q8N684 471 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 POP5Q969H6 163 aaKnown RBP13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 GPR21Q99679 349 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
CX3CL1-204ENST00000565912 BBIP1A8MTZ0 92 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 NADKO95544 446 aaPredicted RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 C2P06681 752 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 BPGMP07738 259 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SPATA31C1P0DKV0 1188 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 CMPK1P30085 196 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 TM4SF1P30408 202 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RYKP34925 604 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 MTHFRP42898 656 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SLC5A3P53794 718 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 CACNG1Q06432 222 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GLYATQ6IB77 296 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SULT1C3Q6IMI6 304 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GPR65Q8IYL9 337 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 FATE1Q969F0 183 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GAL3ST4Q96RP7 486 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 ABCB9Q9NP78 766 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 TFECO14948 347 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms