RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SIX1Q15475 284 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 TSC22D1Q15714 1073 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 AGKQ53H12 422 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FSTL4Q6MZW2 842 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SERPINA9Q86WD7 417 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 CXorf40BQ96DE9 158 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 TFB2MQ9H5Q4 396 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 IL36AQ9UHA7 158 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FKBPLQ9UIM3 349 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 PSME4Q14997 1843 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 UBOX5O94941 541 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 NQO1P15559 274 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 HOXA9P31269 272 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 NFYCQ13952 458 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 TAZQ16635 292 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 GALNTL6Q49A17 601 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ALFQ53S48 1182 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SIRPB2Q5JXA9 342 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 EOGTQ5NDL2 527 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 MCOLN1Q9GZU1 580 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ZDHHC3Q9NYG2 299 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 NDUFAF1Q9Y375 327 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FAM32AQ9Y421 112 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 SPEF1Q9Y4P9 236 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 DYRK3O43781 588 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 NPHS1O60500 1241 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FKBP6O75344 327 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ULK1O75385 1050 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 IDSP22304 550 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SCTRP47872 440 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 HPCAP84074 193 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FASTKQ14296 549 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 ZNF776Q68DI1 518 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 BANPQ8N9N5 519 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FNDC5Q8NAU1 212 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 MED8Q96G25 268 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 CLSTN3Q9BQT9 956 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SHCBP1LQ9BZQ2 653 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 POPDC3Q9HBV1 291 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3DA0A087WVF3 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3IA0A087WXS9 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3EA0A087X179 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3KA0A087X1G2 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 GNG14A0A1W2PPG7 69 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3FA6NER0 549 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3LB9A6J9 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 WNT9AO14904 365 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SNAP91O60641 907 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 LILRB3O75022 631 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3HP0C7X1 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PCNAP12004 261 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TFE3P19532 575 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 HPCAL1P37235 193 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MAGEA6P43360 314 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 ATXN7L2Q5T6C5 722 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3GQ6DHY5 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3CQ6IPX1 549 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PAQR9Q6ZVX9 377 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TBC1D3Q8IZP1 549 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 FIBINQ8TAL6 211 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SELENOMQ8WWX9 145 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 HERVK_113Q902F9 699 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 GPR21Q99679 349 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CCDC3Q9BQI4 270 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 C17orf80Q9BSJ5 609 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 FEM1AQ9BSK4 669 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 WNT6Q9Y6F9 365 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CCDC162PA2VCL2 907 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 DRGXA6NNA5 263 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 H3BM21 787 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 RNASEH2AO75792 299 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
TCF4-216ENST00000562680 FCGR1AP12314 374 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 HSD17B2P37059 387 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CCNFP41002 786 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 LRRC32Q14392 662 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 LRRC26Q2I0M4 334 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CAPN13Q6MZZ7 669 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 IRGCQ6NXR0 463 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PAGE2Q7Z2X7 111 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MYRFLQ96LU7 910 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MARCH5Q9NX47 278 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 H0Y3Z8 333 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 AGPSO00116 658 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 GJA1P17302 382 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 HOXB6P17509 224 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 TAS2R39P59534 338 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CYTH1Q15438 398 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SULT1C3Q6IMI6 304 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 ZCCHC23Q6ZST2 131 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 UBE2R2Q712K3 238 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 SCUBE1Q8IWY4 988 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SMYD1Q8NB12 490 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 OR52K2Q8NGK3 314 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 DIS3LQ8TF46 1054 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms