RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	DBN1	Q16643	649 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	CDKN3	Q16667	212 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	FASTKD1	Q53R41	847 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	TAF1B	Q53T94	588 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	RBM20	Q5T481	1227 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	BRAT1	Q6PJG6	821 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GDPD4	Q6W3E5	623 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	USP45	Q70EL2	814 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	CPLX4	Q7Z7G2	160 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	LDB1	Q86U70	411 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	LCA5	Q86VQ0	697 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	CEP97	Q8IW35	865 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PAF1	Q8N7H5	531 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GPATCH11	Q8N954	259 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	TERB1	Q8NA31	727 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GRIN3A	Q8TCU5	1115 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	LRRC8C	Q8TDW0	803 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF75CP	Q92670	426 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	EID2B	Q96D98	161 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	SCRN2	Q96FV2	425 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	ZC3H10	Q96K80	434 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	TCF12	Q99081	682 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	OLFM1	Q99784	485 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	OMD	Q99983	421 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	HEPH	Q9BQS7	1158 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	OSBPL1A	Q9BXW6	950 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	C8orf33	Q9H7E9	229 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	FGFR1OP2	Q9NVK5	253 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	SIRPG	Q9P1W8	387 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	FKBPL	Q9UIM3	349 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	TLK1	Q9UKI8	766 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PKP3	Q9Y446	797 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	WASF2	Q9Y6W5	498 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	CELSR3	Q9NYQ7	3312 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GON4L	Q3T8J9	2241 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395		A0A087X1B8	175 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CCDC163	A0A0D9SF12	145 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	EDDM13	A0A1B0GTR0	161 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	WDR91	A4D1P6	747 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	NPIPB15	A6NHN6	443 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CYSRT1	A8MQ03	144 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	GAPDHS	O14556	408 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	KLF11	O14901	512 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PHGDH	O43175	533 aa	Known RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	KALRN	O60229	2985 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	LEFTY1	O75610	366 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	WISP3	O95389	354 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CLDN7	O95471	211 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	APOA4	P06727	396 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CTSL	P07711	333 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	BPGM	P07738	259 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	COL6A2	P12110	1019 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	SAT1	P21673	171 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TTPA	P49638	278 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PGGT1B	P53609	377 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC12A2	P55011	1212 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CDKN2D	P55273	166 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CREB5	Q02930	508 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CACNG1	Q06432	222 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF460	Q14592	562 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	ZSCAN26	Q16670	478 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CCDC153	Q494R4	210 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PLK5	Q496M5	336 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	FNDC3B	Q53EP0	1204 aa	Known RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	ZRANB3	Q5FWF4	1079 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	AARS2	Q5JTZ9	985 aa	Known RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	RNF187	Q5TA31	235 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	HECTD2	Q5U5R9	776 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	NAIF1	Q69YI7	327 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM45BP	Q6NSW5	357 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CGB2	Q6NT52	195 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	C16orf46	Q6P387	395 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF549	Q6P9A3	640 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	FOXR1	Q6PIV2	292 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TXNDC11	Q6PKC3	985 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CRTC1	Q6UUV9	634 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	RAPH1	Q70E73	1250 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CCDC91	Q7Z6B0	441 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PIGW	Q7Z7B1	504 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TSPAN33	Q86UF1	283 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	C11orf74	Q86VG3	221 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	SFTPA1	Q8IWL2	248 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TRIM42	Q8IWZ5	723 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PIANP	Q8IYJ0	282 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CENPL	Q8N0S6	344 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PLD6	Q8N2A8	252 aa	Known RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	SYNPO	Q8N3V7	929 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	PNPLA1	Q8N8W4	532 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	DEFB124	Q8NES8	71 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TTC8	Q8TAM2	541 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	RAB3IL1	Q8TBN0	382 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM45A	Q8TCE6	357 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	LPGAT1	Q92604	370 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CHFR	Q96EP1	664 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	CCDC97	Q96F63	343 aa	Predicted RBP	7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	TSPAN17	Q96FV3	270 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	POM121	Q96HA1	1249 aa		7.47	□□□□□ -1.21
TPM1-231	ENST00000561395	LRIG1	Q96JA1	1093 aa		7.47	□□□□□ -1.21

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