RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 OGFOD3Q6PK18 319 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 CCNI2Q6ZMN8 369 aaPredicted RBP19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 ZNF398Q8TD17 642 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 DTX3LQ8TDB6 740 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 ACTRT1Q8TDG2 376 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 CNTNAP3BQ96NU0 1288 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 CNTNAP3Q9BZ76 1288 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 ASB8Q9H765 288 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 RABGEF1Q9UJ41 708 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 APPL1Q9UKG1 709 aa19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 ARHGEF17Q96PE2 2063 aaPredicted RBP19.68■□□□□ 0.74
TSPAN3-210ENST00000561277 FAM221BA6H8Z2 402 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 C1QTNF9BB2RNN3 333 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 ECEL1O95672 775 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 GAS8O95995 478 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 C1QTNF9P0C862 333 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 AKT1P31749 480 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 HADHAP40939 763 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 TMEM115Q12893 351 aaPredicted RBP19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 PEX6Q13608 980 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 GTF2H3Q13889 308 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 INSCQ1MX18 579 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 CERCAMQ5T4B2 595 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 GPRC6AQ5T6X5 926 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 MICALCLQ6ZW33 695 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 LRRTM4Q86VH4 590 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 TRAPPC5Q8IUR0 188 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 C17orf53Q8N3J3 647 aaPredicted RBP19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 CLCA2Q9UQC9 943 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 ASXL3Q9C0F0 2248 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 PLXNB3Q9ULL4 1909 aa19.67■□□□□ 0.74
TSPAN3-210ENST00000561277 FREM2Q5SZK8 3169 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 GOLGA6L10A0A0M3HER8 536 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 GPR89AB7ZAQ6 455 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 CES2O00748 559 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 CHUKO15111 745 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 SNX2O60749 519 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 GPR89BP0CG08 455 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 GLB1P16278 677 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 TCP1P17987 556 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 XIAPP98170 497 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 TARDBPQ13148 414 aaKnown RBP eCLIP19.66■□□□□ 0.744e-14■■□□□ 14.4
TSPAN3-210ENST00000561277 NFATC2Q13469 925 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 HLTFQ14527 1009 aaKnown RBP eCLIP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 LDLRAP1Q5SW96 308 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 CCDC137Q6PK04 289 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 C4orf22Q6V702 233 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 NAGSQ8N159 534 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 DDHD1Q8NEL9 900 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 NAPGQ99747 312 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 ZCCHC2Q9C0B9 1178 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 OSGEPL1Q9H4B0 414 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 FAM96AQ9H5X1 160 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 KLC4Q9NSK0 619 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 SMOXQ9NWM0 555 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 LRIT1Q9P2V4 623 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 RNF215Q9Y6U7 377 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 RP1P56715 2156 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 EML2O95834 649 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 MT-CO3P00414 261 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 COILP38432 576 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 BIRC2Q13490 618 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 UNQ6494/PRO21346Q6UXR6 183 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 ZNF547Q8IVP9 402 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 Q8N9G6 341 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 OR6C4Q8NGE1 309 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 GATA6Q92908 595 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 CAPZA3Q96KX2 299 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 NLE1Q9NVX2 485 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 TBC1D29Q9UFV1 150 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 CRLS1Q9UJA2 301 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 DNAJC16Q9Y2G8 782 aa19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 ZFC3H1O60293 1989 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-210ENST00000561277 TRBV23OR9-2A0A075B6M9 112 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 KMOO15229 486 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 PHF2O75151 1096 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 KRT14P02533 472 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 ITGALP20701 1170 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 MC4RP32245 332 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 GPS1Q13098 491 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 CYP1B1Q16678 543 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 ZRANB3Q5FWF4 1079 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 DET1Q7L5Y6 550 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 RASGEF1AQ8N9B8 481 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 STYXQ8WUJ0 223 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 NAT14Q8WUY8 206 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 TMEM121BQ9BXQ6 578 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 CASS4Q9NQ75 786 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 EIF2B3Q9NR50 452 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 SLC23A2Q9UGH3 650 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 SLC30A1Q9Y6M5 507 aa19.65■□□□□ 0.74
TSPAN3-210ENST00000561277 OR2AG2A6NM03 316 aa19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 RPLP0P05388 317 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 ZNF7P17097 686 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 MSH3P20585 1137 aa19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 SNX20Q7Z614 316 aa19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 C17orf82Q86X59 251 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 ARL14Q8N4G2 192 aa19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 DCBLD1Q8N8Z6 715 aa19.64■□□□□ 0.73
TSPAN3-210ENST00000561277 C19orf43Q9BQ61 176 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms