RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CSPG4P5Q96PW8 444 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 SYT11Q9BT88 431 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 ACTL8Q9H568 366 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 NT5MQ9NPB1 228 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 TAS2R14Q9NYV8 317 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 RCOR3Q9P2K3 495 aaPredicted RBP18.27■□□□□ 0.52
TPM1-226ENST00000560959 AMACRQ9UHK6 382 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 ZNF451Q9Y4E5 1061 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 CELSR2Q9HCU4 2923 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 RASSF9O75901 435 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 PRLP01236 227 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 CA4P22748 312 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 SLC19A1P41440 591 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 LEPRP48357 1165 aaKnown RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 INPP5JQ15735 1006 aaPredicted RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 CACHD1Q5VU97 1274 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 ELMO2Q96JJ3 720 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 PCMTD1Q96MG8 357 aaPredicted RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 SMIM14Q96QK8 99 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 TDRD1Q9BXT4 1180 aaKnown RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 SLC29A3Q9BZD2 475 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 TRIM39Q9HCM9 518 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 KLC4Q9NSK0 619 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 POT1Q9NUX5 634 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 HAUS2Q9NVX0 235 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 PKD2L2Q9NZM6 624 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 SCHIP1Q9P0W5 487 aaPredicted RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 ZNF624Q9P2J8 865 aaPredicted RBP18.26■□□□□ 0.51
TPM1-226ENST00000560959 ATXN10Q9UBB4 475 aa18.26■□□□□ 0.51
TPM1-226ENST00000560959 CACNA1DQ01668 2161 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 CENPEQ02224 2701 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 TCP11X1B4DZS4 312 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 CHUKO15111 745 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 CEACAM4O75871 244 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ZNF8P17098 575 aaPredicted RBP18.25■□□□□ 0.51
TPM1-226ENST00000560959 LPOP22079 712 aaPredicted RBP18.25■□□□□ 0.51
TPM1-226ENST00000560959 CAPZBP47756 277 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 RPS15P62841 145 aaKnown RBP18.25■□□□□ 0.51
TPM1-226ENST00000560959 ITKQ08881 620 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ANKRD20A8PQ5CZ79 823 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ABRAXAS1Q6UWZ7 409 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 WASH2PQ6VEQ5 465 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 TRIM48Q8IWZ4 208 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 CCHCR1Q8TD31 782 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 FATE1Q969F0 183 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ERGIC2Q96RQ1 377 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ING2Q9H160 280 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 SLC40A1Q9NP59 571 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 WASH6PQ9NQA3 447 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 ACSS2Q9NR19 701 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 CHKBQ9Y259 395 aa18.25■□□□□ 0.51
TPM1-226ENST00000560959 A1L4Q6 167 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 LRRC10BA6NIK2 292 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 DPM1O60762 260 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 GZMAP12544 262 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 IL1R2P27930 398 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 DCTP40126 519 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 LAMB3Q13751 1172 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 IHHQ14623 411 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 CHRNA6Q15825 494 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 EIF2S3LQ2VIR3 472 aaKnown RBP18.24■□□□□ 0.51
TPM1-226ENST00000560959 JMJD6Q6NYC1 403 aaPredicted RBP18.24■□□□□ 0.51
TPM1-226ENST00000560959 UBXN4Q92575 508 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 MAML1Q92585 1016 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 SLC41A2Q96JW4 573 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 TRIM7Q9C029 511 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 CASS4Q9NQ75 786 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 RARRES3Q9UL19 164 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
TPM1-226ENST00000560959 CRYBG3Q68DQ2 2970 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 C1orf232A0A0U1RR37 186 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 LGALS16A8MUM7 142 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 KMOO15229 486 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 MATN3O15232 486 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 KIF1CO43896 1103 aaKnown RBP18.23■□□□□ 0.51
TPM1-226ENST00000560959 MTA2O94776 668 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 CCL11P51671 97 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 ACY1Q03154 408 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 PDPK2PQ6A1A2 396 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 ZNF787Q6DD87 383 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 TIMM29Q9BSF4 260 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 OSGEPL1Q9H4B0 414 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 PCDH9Q9HC56 1237 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 FARSAQ9Y285 508 aaKnown RBP18.23■□□□□ 0.51
TPM1-226ENST00000560959 SCINQ9Y6U3 715 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 PRRC2CQ9Y520 2896 aaKnown RBP18.23■□□□□ 0.51
TPM1-226ENST00000560959 DOPEY1Q5JWR5 2465 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 SHANK1Q9Y566 2161 aa18.23■□□□□ 0.51
TPM1-226ENST00000560959 SSU72P8A0A1W2PR75 194 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 TMCO5BA8MYB1 307 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 SLC25A14O95258 325 aaPredicted RBP18.22■□□□□ 0.51
TPM1-226ENST00000560959 TIAF1O95411 115 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 CLDN1O95832 211 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 ZNF165P49910 485 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 PDE1BQ01064 536 aa18.22■□□□□ 0.51
TPM1-226ENST00000560959 TUBB3Q13509 450 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms