RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RAB17Q9H0T7 212 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 CARS2Q9HA77 564 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 CYP4F12Q9HCS2 524 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 BPIFA1Q9NP55 256 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM114A2Q9NRY5 505 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 PCDHGA1Q9Y5H4 931 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 SLC30A1Q9Y6M5 507 aa13.85□□□□□ -0.19
PKNOX1-209ENST00000560448 INPP4BO15327 924 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 NUAK1O60285 661 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 SDC3O75056 442 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 TRIM16O95361 564 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 ASMTLO95671 621 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 LDOC1O95751 146 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 RALBP11234 206 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 PPARGP37231 505 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 ADCY8P40145 1251 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 ACVR1Q04771 509 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 GTF2H3Q13889 308 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 SEPT6Q14141 434 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 TRIP13Q15645 432 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 ATP13A5Q4VNC0 1218 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 PYCR3Q53H96 274 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 C6orf132Q5T0Z8 1188 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 FAM151BQ6UXP7 276 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 RD3Q7Z3Z2 195 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 BBOF1Q8ND07 529 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 CPT1BQ92523 772 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 MOSPD1Q9UJG1 213 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 SUFUQ9UMX1 484 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 GPR34Q9UPC5 381 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 TCAF1Q9Y4C2 921 aa13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-209ENST00000560448 CFAP99D6REC4 459 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 F8W8V4 182 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 GAPDHSO14556 408 aaPredicted RBP13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 DNALI1O14645 258 aaPredicted RBP13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CHUKO15111 745 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 DNAJC6O75061 913 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 SLC2A4P14672 509 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CKMT2P17540 419 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 TPH1P17752 444 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 VPS41P49754 854 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CLCNKAP51800 687 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 XIAPP98170 497 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CACNG1Q06432 222 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 TSTD2Q5T7W7 516 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 LYPLAL1Q5VWZ2 237 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CERS6Q6ZMG9 384 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 KDM7AQ6ZMT4 941 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 RBFAQ8N0V3 343 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 EID2Q8N6I1 236 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 NAT8LQ8N9F0 302 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 AVL9Q8NBF6 648 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 OR13C4Q8NGS5 318 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CDKN2AIPNLQ96HQ2 116 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 KIFC1Q9BW19 673 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 BOCQ9BWV1 1114 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 ASB8Q9H765 288 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 FKBPLQ9UIM3 349 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 PCNX2A6NKB5 2137 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 DMXL1Q9Y485 3027 aa13.83□□□□□ -0.2
PKNOX1-209ENST00000560448 TRBV5-4A0A0C4DH59 114 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 QSOX1O00391 747 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 KMOO15229 486 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GRID2O43424 1007 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 CDK14O94921 469 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GP1BAP07359 652 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GSTM1P09488 218 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GIMD1P0DJR0 217 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 CKMT1AP12532 417 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 VCLP18206 1134 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 PAMP19021 973 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ACP1P24666 158 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GRIA1P42261 906 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GNPDA1P46926 289 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 PRAMEP78395 509 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GSTM4Q03013 218 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 TMEM115Q12893 351 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 MORF4L2Q15014 288 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 KCTD19Q17RG1 926 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 AARS2Q5JTZ9 985 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 CERCAMQ5T4B2 595 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 RNASEH2BQ5TBB1 312 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 PSAPL1Q6NUJ1 521 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 DOK6Q6PKX4 331 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms