RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 RBM15BQ8NDT2 890 aaKnown RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 OR1N1Q8NGS0 311 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 OR13C3Q8NGS6 347 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC22A17Q8WUG5 538 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 NSMCE1Q8WV22 266 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 PSPC1Q8WXF1 523 aaKnown RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 P3H4Q92791 437 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 CORO2AQ92828 525 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 EAF2Q96CJ1 260 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 GRAMD1AQ96CP6 724 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 MRPL38Q96DV4 380 aaKnown RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCDC51Q96ER9 411 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 RNFT2Q96EX2 444 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC41A2Q96JW4 573 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 GCNAQ96QF7 691 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 GPA33Q99795 319 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 JPH2Q9BR39 696 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 REEP2Q9BRK0 252 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMEM175Q9BSA9 504 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 WACQ9BTA9 647 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC12A9Q9BXP2 914 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 DGCR6LQ9BY27 220 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ACE2Q9BYF1 805 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 RTN4RQ9BZR6 473 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 FTOQ9C0B1 505 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ANKRD2Q9GZV1 360 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC22A4Q9H015 551 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 VCX2Q9H322 139 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ABHD16BQ9H3Z7 469 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ATP13A3Q9H7F0 1226 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZMAT4Q9H898 229 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 GCM1Q9NP62 436 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 RBM12Q9NTZ6 932 aaKnown RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 C20orf96Q9NUD7 363 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLCXD1Q9NUJ7 323 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ETNK2Q9NVF9 386 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARL8BQ9NVJ2 186 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZSCAN32Q9NX65 697 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 EURLQ9NYK6 297 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 VSX1Q9NZR4 365 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 CPNE7Q9UBL6 633 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 CTNNAL1Q9UBT7 734 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 CTSFQ9UBX1 484 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 OSGIN1Q9UJX0 560 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 SPATA2Q9UM82 520 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 PCDHA6Q9UN73 950 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 GABRQQ9UN88 632 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 ERGIC3Q9Y282 383 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 AP3M1Q9Y2T2 418 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLLPQ9Y342 182 aa4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 PUS1Q9Y606 427 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM237AA0A1B0GTK4 181 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM240BA0A1B0GVZ2 78 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 SSU72P8A0A1W2PR75 194 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 TCRBV21S2A2A0A5A6 115 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 TUBAL3A6NHL2 446 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 OTOL1A6NHN0 477 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARHGAP42A6NI28 874 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 CBY3A6NI87 242 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 CLCA1A8K7I4 914 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 TCP11X1B4DZS4 312 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM47E-STBD1D6RA91 191 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 H0YJX3 145 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 H7C1D1 291 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 RBAK-RBAKDNI3L0D1 243 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 HRKO00198 91 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARNTLO00327 626 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 MATN2O00339 956 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLK4O00444 970 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PODXLO00592 558 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 GPR171O14626 319 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAP2K7O14733 419 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PIP5K1BO14986 540 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 INPPL1O15357 1258 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 SEPT4O43236 478 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PSPNO60542 156 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 CABYRO75952 493 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PGLSO95336 258 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 DEXIO95424 95 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 RAB3DO95716 219 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 TGFAP01135 160 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 RPLP2P05387 115 aaKnown RBP4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRKCBP05771 671 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 UROSP10746 265 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 BRAFP15056 766 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 ATF2P15336 505 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 TCN1P20061 433 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PTNP21246 168 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 MYF6P23409 242 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 SFNP31947 248 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 HMGCLP35914 325 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PGM1P36871 562 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 MCAMP43121 646 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAGEA11P43364 429 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 KCNJ5P48544 419 aa4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 CARSP49589 748 aaKnown RBP4.48□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLK1P53350 603 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms