RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
RORA-212ENST00000560004 SLC17A4Q9Y2C5 497 aa11.31□□□□□ -0.6
RORA-212ENST00000560004 PSAT1Q9Y617 370 aa11.31□□□□□ -0.6
RORA-212ENST00000560004 SDK1Q7Z5N4 2213 aa11.31□□□□□ -0.6
RORA-212ENST00000560004 GPR179Q6PRD1 2367 aa11.31□□□□□ -0.6
RORA-212ENST00000560004 PI4KAP42356 2102 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 ZFC3H1O60293 1989 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 A0A1B0GVT2 93 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 CCDC151A5D8V7 595 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 CACNB4O00305 520 aaPredicted RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 VILLO15195 856 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 OR1I1O60431 355 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 DNAJC6O75061 913 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 SLC25A14O95258 325 aaPredicted RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 CEACAM5P06731 702 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 GABRB3P28472 473 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 STX2P32856 288 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 HOXD12P35452 270 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 MPLP40238 635 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 POLD2P49005 469 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 CSNK1EP49674 416 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 AFF3P51826 1226 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 EIF2B5Q13144 721 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 CTBP1Q13363 440 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 FZD2Q14332 565 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 ITIH4Q14624 930 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 AARS2Q5JTZ9 985 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 CTSL3PQ5NE16 218 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 PLA2G2CQ5R387 149 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 LDLRAP1Q5SW96 308 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 LAIR1Q6GTX8 287 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 DOK6Q6PKX4 331 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 XKR5Q6UX68 686 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 CERS6Q6ZMG9 384 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 MARK2Q7KZI7 788 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 LMNTD2Q8IXW0 634 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 MREGQ8N565 214 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 FAM174AQ8TBP5 190 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 OR1E3Q8WZA6 343 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 PIGKQ92643 395 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 COPS8Q99627 209 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 P2RY12Q9H244 342 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 ACSS3Q9H6R3 686 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 CAPN10Q9HC96 672 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 MRPL40Q9NQ50 206 aaKnown RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 FBXO6Q9NRD1 293 aaPredicted RBP11.3□□□□□ -0.6
RORA-212ENST00000560004 ATXN10Q9UBB4 475 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 FRYLO94915 3013 aa11.3□□□□□ -0.6
RORA-212ENST00000560004 SPTY2D1-AS1A0A0U1RR47 76 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 PRSS38A1L453 326 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 TLR4O00206 839 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 S1PR4O95977 384 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 SHBGP04278 402 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 H2AFXP16104 143 aaPredicted RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 ZNF8P17098 575 aaPredicted RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 GCAP28676 217 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 PHBP35232 272 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 HSD17B3P37058 310 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 CTSKP43235 329 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 ABCG1P45844 678 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 LEPRP48357 1165 aaKnown RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 CTSCP53634 463 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 OVGP1Q12889 678 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 BRD3Q15059 726 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 CCDC6Q16204 474 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 ALG11Q2TAA5 492 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 MRNIPQ6NTE8 343 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 TAS2R42Q7RTR8 314 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 ZNF547Q8IVP9 402 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 OTUD6BQ8N6M0 293 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 RASGEF1AQ8N9B8 481 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 OR56A4Q8NGH8 313 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 LKAAEAR1Q8TD35 194 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 CALML6Q8TD86 181 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 ATOH1Q92858 354 aaPredicted RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■■■■■ 44.5
RORA-212ENST00000560004 KLHDC7BQ96G42 594 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 BIRC8Q96P09 236 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 OR2AG1Q9H205 316 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 SMOC1Q9H4F8 434 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 TRIM39Q9HCM9 518 aa11.29□□□□□ -0.6
RORA-212ENST00000560004 PPANQ9NQ55 473 aaKnown RBP11.29□□□□□ -0.6
RORA-212ENST00000560004 INTS10Q9NVR2 710 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms