RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SLC22A2O15244 555 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 APODP05090 189 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 CD72P21854 359 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 HMGCLP35914 325 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 PGM1P36871 562 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 ATP6V0D1P61421 351 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 MXRA7P84157 204 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 RAD51Q06609 339 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 RAB44Q7Z6P3 723 aaPredicted RBP17.65■□□□□ 0.42
SNX1-208ENST00000559844 KIAA0907Q7Z7F0 614 aaPredicted RBP17.65■□□□□ 0.42
SNX1-208ENST00000559844 STK40Q8N2I9 435 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 KDM1BQ8NB78 822 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 RBM15BQ8NDT2 890 aaKnown RBP17.65■□□□□ 0.42
SNX1-208ENST00000559844 AGAP11Q8TF27 550 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 FAM3CQ92520 227 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 SMIM14Q96QK8 99 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 CIPCQ9C0C6 399 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 ATP13A3Q9H7F0 1226 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 ACSS2Q9NR19 701 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 IL17CQ9P0M4 197 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 EVLQ9UI08 416 aaPredicted RBP17.65■□□□□ 0.42
SNX1-208ENST00000559844 SHISA7A6NL88 538 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PRRT4C9JH25 899 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 HTRA2O43464 458 aaPredicted RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 ZBTB14O43829 449 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 VPS26AO75436 327 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 LMNAP02545 664 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 PRSS56P0CW18 603 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PKMP14618 531 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 GRIA2P42262 883 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 COPAP53621 1224 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 CACNG1Q06432 222 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PEX6Q13608 980 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 SH2D4BQ5SQS7 431 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 TMEM215Q68D42 235 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 FRMD7Q6ZUT3 714 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 SIX5Q8N196 739 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 NKAPQ8N5F7 415 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 WFIKKN2Q8TEU8 576 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 OR52B2Q96RD2 323 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 NUF2Q9BZD4 464 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 DERL2Q9GZP9 239 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 CD248Q9HCU0 757 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 SLC30A1Q9Y6M5 507 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 CCDC189A1A4V9 331 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 KRBA1A5PL33 1030 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 E9PBE3 544 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 SMAD6O43541 496 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 KLHL41O60662 606 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 EZRP15311 586 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 ADSLP30566 484 aaPredicted RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 PPARGP37231 505 aaPredicted RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 PTGER3P43115 390 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 ADARP55265 1226 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 SATB1Q01826 763 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PRKCQQ04759 706 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 DMC1Q14565 340 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PTPRNQ16849 979 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 TMEM196Q5HYL7 178 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PSAPL1Q6NUJ1 521 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 NUDT18Q6ZVK8 323 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 CAMK1DQ8IU85 385 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 PTERQ96BW5 349 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 BPIFA1Q9NP55 256 aa17.64■□□□□ 0.41
SNX1-208ENST00000559844 OAS3Q9Y6K5 1087 aaKnown RBP17.64■□□□□ 0.41
SNX1-208ENST00000559844 GOLGA8CPA6NN73 597 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 MAN2B1O00754 1011 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 POLR2EP19388 210 aaKnown RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 SERPINA4P29622 427 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 RAP1GDS1P52306 607 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 SNRPD1P62314 119 aaKnown RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 ZXDAP98168 799 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 GRSF1Q12849 480 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX1-208ENST00000559844 NAA25Q14CX7 972 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 LSM12Q3MHD2 195 aaKnown RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 ZNF678Q5SXM1 525 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 CERS6Q6ZMG9 384 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 ZNF852Q6ZMS4 543 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 RYBPQ8N488 228 aaPredicted RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 PAF1Q8N7H5 531 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 OR2AP1Q8NGE2 309 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 SORCS1Q8WY21 1168 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 KIAA1191Q96A73 305 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 ISG20Q96AZ6 181 aaKnown RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 PHF21BQ96EK2 531 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 SHCBP1LQ9BZQ2 653 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 DENND2DQ9H6A0 471 aaPredicted RBP17.63■□□□□ 0.41
SNX1-208ENST00000559844 MRGBPQ9NV56 204 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 PLA2G4CQ9UP65 541 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 BDP1A6H8Y1 2624 aa17.63■□□□□ 0.41
SNX1-208ENST00000559844 GOLGA8QA0A0J9YX86 632 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 A0A0J9YYE9 177 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 GOLGA8OA6NCC3 632 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 GOLGA8NF8WBI6 632 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 NEMP1O14524 444 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 DCXO43602 365 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TRBC1P01850 177 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 ESR1P03372 595 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CTPS1P17812 591 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CTSOP43234 321 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms