RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 AOPEPQ8N6M6 819 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 SIDT2Q8NBJ9 832 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 MLXIPLQ9NP71 852 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 NT5MQ9NPB1 228 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 SAMSN1Q9NSI8 373 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 ERRFI1Q9UJM3 462 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC5A6Q9Y289 635 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 CELSR2Q9HCU4 2923 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 DOPEY1Q5JWR5 2465 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 NUAK1O60285 661 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 MAFKO60675 156 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 PEX11BO96011 259 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 LDLRP01130 860 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 CA4P22748 312 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 MIPP30301 263 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 CLCNKAP51800 687 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 TUBB3Q13509 450 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 INSCQ1MX18 579 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 MOCOSQ96EN8 888 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 FCRL4Q96PJ5 515 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 SMIM14Q96QK8 99 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 POLR1EQ9GZS1 481 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 FAM83DQ9H4H8 585 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 HAUS2Q9NVX0 235 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 PKD2L2Q9NZM6 624 aa17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 CNOT6Q9ULM6 557 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-204ENST00000558394 PRRC2CQ9Y520 2896 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 WIPF3A6NGB9 483 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 EPHB6O15197 1021 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 KIF1CO43896 1103 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 CLDN7O95471 211 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 NELFEP18615 380 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 SERPINB6P35237 376 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 CAPZBP47756 277 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 ARL4DP49703 201 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 NAA30Q147X3 362 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 DPCR1Q3MIW9 517 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 PWWP2BQ6NUJ5 590 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 PPP1R2P3Q6NXS1 205 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 FAM199XQ6PEV8 388 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 BPHLQ86WA6 291 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 PNPLA2Q96AD5 504 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 RUFY1Q96T51 708 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 POT1Q9NUX5 634 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 FARSAQ9Y285 508 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 TTLL3Q9Y4R7 772 aa17.54■□□□□ 0.4
TSPAN3-204ENST00000558394 ABCA12Q86UK0 2595 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 C1orf232A0A0U1RR37 186 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 FADS2P1A8MWK0 482 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 FZD6O60353 706 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 TIAF1O95411 115 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 CCDC172P0C7W6 258 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 AMPD1P23109 780 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC19A1P41440 591 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 RIPPLY3P57055 190 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 ACY1Q03154 408 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 NR6A1Q15406 480 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 TTC13Q8NBP0 860 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 UBXN4Q92575 508 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 RSC1A1Q92681 617 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 MR1Q95460 341 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 TCTN2Q96GX1 697 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 OR2AG1Q9H205 316 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 SCHIP1Q9P0W5 487 aaPredicted RBP17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 ATXN10Q9UBB4 475 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 DNAJC16Q9Y2G8 782 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 ZNF8P17098 575 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 PTGIRP43119 386 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 SPINT3P49223 89 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 IL10RAQ13651 578 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 BECN1Q14457 450 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 PLA2G4EQ3MJ16 856 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 ANKRD20A8PQ5CZ79 823 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 ZRANB3Q5FWF4 1079 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 HENMT1Q5T8I9 393 aaKnown RBP17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 C1QL3Q5VWW1 255 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC6A19Q695T7 634 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 CRTC3Q6UUV7 619 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC34A3Q8N130 599 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 ARFGAP1Q8N6T3 406 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 Q8NA96 180 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 LPCAT1Q8NF37 534 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 WASH6PQ9NQA3 447 aa17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 ZNF624Q9P2J8 865 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-204ENST00000558394 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms