RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 GPR27Q9NS67 375 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 MKS1Q9NXB0 559 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 IPO11Q9UI26 975 aaKnown RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 LNPEPQ9UIQ6 1025 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ZNF180Q9UJW8 692 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ZMIZ1Q9ULJ6 1067 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 HS3ST3A1Q9Y663 406 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TEX264Q9Y6I9 313 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKRD36A6QL64 1941 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 LRRK1Q38SD2 2015 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 ARID1BQ8NFD5 2236 aaPredicted RBP10.27□□□□□ -0.77
TPM1-212ENST00000558347 NEMP1O14524 444 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 MMP20O60882 483 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 MT-ND3P03897 115 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 CAPNS1P04632 268 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TIMP2P16035 220 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 SSTR1P30872 391 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 FDFT1P37268 417 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TEX44Q53QW1 395 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 DHRS13Q6UX07 377 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 KYAT3Q6YP21 454 aaKnown RBP10.27□□□□□ -0.77
TPM1-212ENST00000558347 OTOAQ7RTW8 1153 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TMPRSS7Q7RTY8 843 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TRIM42Q8IWZ5 723 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 ZNF567Q8N184 647 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 SLC25A45Q8N413 288 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 AGAP11Q8TF27 550 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 ERP27Q96DN0 273 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 APOPT1Q96IL0 206 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TEKT5Q96M29 485 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 LENG8Q96PV6 779 aaPredicted RBP10.27□□□□□ -0.77
TPM1-212ENST00000558347 ETNK1Q9HBU6 452 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 UCKL1Q9NWZ5 548 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 C15orf41Q9Y2V0 281 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
TPM1-212ENST00000558347 TDRD6O60522 2096 aaKnown RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 CELSR3Q9NYQ7 3312 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 TSPAN11A1L157 253 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 KCNK1O00180 336 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 TRIM38O00635 465 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 FPGTO14772 594 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 KLF11O14901 512 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 MUSKO15146 869 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 PEX11BO96011 259 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 INHBAP08476 426 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 DGKAP23743 735 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ACADVLP49748 655 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 CLDN6P56747 220 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 BASP1P80723 227 aaKnown RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 CDK18Q07002 472 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ZBTB17Q13105 803 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SGCGQ13326 291 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SEMA5AQ13591 1074 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 WASHC2DQ5SRD0 308 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 HP1BP3Q5SSJ5 553 aaPredicted RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 LGSNQ5TDP6 509 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 FAM91A1Q658Y4 838 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ITPRIPL1Q6GPH6 555 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ZSWIM9Q86XI8 627 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 CAMK1DQ8IU85 385 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 KLHDC8BQ8IXV7 354 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 TEX26Q8N6G2 289 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 MCUQ8NE86 351 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ASB12Q8WXK4 309 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 ZCCHC14Q8WYQ9 949 aaKnown RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 RSRC1Q96IZ7 334 aaKnown RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 NSMCE3Q96MG7 304 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
TPM1-212ENST00000558347 TRIM55Q9BYV6 548 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SUV39H2Q9H5I1 410 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SP110Q9HB58 689 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SLCO1B3Q9NPD5 702 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 BATF3Q9NR55 127 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 RAB6BQ9NRW1 208 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 COQ6Q9Y2Z9 468 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SHROOM3Q8TF72 1996 aa10.26□□□□□ -0.77
TPM1-212ENST00000558347 SPTY2D1-AS1A0A0U1RR47 76 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 TCRBV7S3A2A0A539 114 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 FAM149AA5PLN7 773 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 TMEM8BA6NDV4 472 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 DNAJC6O75061 913 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 BANF1O75531 89 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 RFPL3O75679 317 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 PIAS2O75928 621 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 METTL18O95568 372 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 JCHAINP01591 159 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 PRKCGP05129 697 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 TPSB2P20231 275 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 PTPN4P29074 926 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 IGFALSP35858 605 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 ELK3P41970 407 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 RABIFP47224 123 aa10.25□□□□□ -0.77
TPM1-212ENST00000558347 RENBPP51606 427 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms