RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF500O60304 480 aaPredicted RBP25.27■■□□□ 1.64
SMAD6-202ENST00000557916 CDK14O94921 469 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 CELA2BP08218 269 aaPredicted RBP25.27■■□□□ 1.64
SMAD6-202ENST00000557916 NMBRP28336 390 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 PRAMEP78395 509 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 CACNG1Q06432 222 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 TMEM115Q12893 351 aaPredicted RBP25.27■■□□□ 1.64
SMAD6-202ENST00000557916 PYCR3Q53H96 274 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 DUPD1Q68J44 220 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 TAS2R42Q7RTR8 314 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 MMGT1Q8N4V1 131 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 OR6P1Q8NGX9 317 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 TTC25Q96NG3 672 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 CAMK1GQ96NX5 476 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 OR2M4Q96R27 311 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 LRRC1Q9BTT6 524 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 RAB17Q9H0T7 212 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 TREX1Q9NSU2 369 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 TRNAU1APQ9NX07 287 aaKnown RBP25.27■■□□□ 1.64
SMAD6-202ENST00000557916 DLL3Q9NYJ7 618 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 OR51F1A6NGY5 319 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 GPR89AB7ZAQ6 455 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 LMO7DNF2Z398 122 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 GOT2P00505 430 aaKnown RBP25.26■■□□□ 1.63
SMAD6-202ENST00000557916 GPR89BP0CG08 455 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 PRSS56P0CW18 603 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 CDKN1CP49918 316 aaPredicted RBP25.26■■□□□ 1.63
SMAD6-202ENST00000557916 CES3Q6UWW8 571 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 NXPE1Q8N323 547 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 CEP112Q8N8E3 955 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 SIGLEC10Q96LC7 697 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 ZCCHC2Q9C0B9 1178 aaKnown RBP25.26■■□□□ 1.63
SMAD6-202ENST00000557916 SLC32A1Q9H598 525 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 PCOLCE2Q9UKZ9 415 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 PRKAB1Q9Y478 270 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 MAD1L1Q9Y6D9 718 aa25.26■■□□□ 1.63
SMAD6-202ENST00000557916 TRBV5-4A0A0C4DH59 114 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 ESPNB1AK53 854 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 TP73O15350 636 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 YY2O15391 372 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 GRID2O43424 1007 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 ANXA6P08133 673 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 GIMD1P0DJR0 217 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 ALPPL2P10696 532 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 MSH3P20585 1137 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 CSRP1P21291 193 aaKnown RBP25.25■■□□□ 1.63
SMAD6-202ENST00000557916 AKT1P31749 480 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 CALCOCO2Q13137 446 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 GTF2H3Q13889 308 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 DEFB133Q30KQ1 61 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 DNAJC21Q5F1R6 531 aaKnown RBP25.25■■□□□ 1.63
SMAD6-202ENST00000557916 FNBP1LQ5T0N5 605 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 AFTPHQ6ULP2 937 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 TAF8Q7Z7C8 310 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 GKN2Q86XP6 184 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 PDIK1LQ8N165 341 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 AGGF1Q8N302 714 aaeCLIP25.25■■□□□ 1.63
SMAD6-202ENST00000557916 SDR16C5Q8N3Y7 309 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 DEFB124Q8NES8 71 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 OR4C6Q8NH72 309 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 CCL4L1Q8NHW4 92 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 MFSD3Q96ES6 412 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 NLGN3Q9NZ94 848 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 WHRNQ9P202 907 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 DOLKQ9UPQ8 538 aa25.25■■□□□ 1.63
SMAD6-202ENST00000557916 PCYT1BQ9Y5K3 369 aaPredicted RBP25.25■■□□□ 1.63
SMAD6-202ENST00000557916 FAM237BA0A1B0GVD1 139 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 CHUKO15111 745 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 CBFA2T3O75081 653 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 FOXN2P32314 431 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 DEKP35659 375 aaKnown RBP25.24■■□□□ 1.63
SMAD6-202ENST00000557916 ILF3Q12906 894 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMAD6-202ENST00000557916 PSAPL1Q6NUJ1 521 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 SERPINA9Q86WD7 417 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 PIANPQ8IYJ0 282 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 NOA1Q8NC60 698 aaKnown RBP25.24■■□□□ 1.63
SMAD6-202ENST00000557916 OR4L1Q8NH43 312 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 COPS8Q99627 209 aa25.24■■□□□ 1.63
SMAD6-202ENST00000557916 TRIM38O00635 465 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 TPP1O14773 563 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 ACRV1P26436 265 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 CTBSQ01459 385 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 SLC7A5Q01650 507 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 DHX9Q08211 1270 aaKnown RBP25.23■■□□□ 1.63
SMAD6-202ENST00000557916 BBS9Q3SYG4 887 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 MSS51Q4VC12 460 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 DNTTIP2Q5QJE6 756 aaKnown RBP25.23■■□□□ 1.63
SMAD6-202ENST00000557916 CHST15Q7LFX5 561 aaPredicted RBP25.23■■□□□ 1.63
SMAD6-202ENST00000557916 RASGEF1AQ8N9B8 481 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 GPBAR1Q8TDU6 330 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 SCG3Q8WXD2 468 aaKnown RBP25.23■■□□□ 1.63
SMAD6-202ENST00000557916 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.23■■□□□ 1.63
SMAD6-202ENST00000557916 DCUN1D1Q96GG9 259 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 SGSM3Q96HU1 749 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 PWWP2AQ96N64 755 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 DUSP23Q9BVJ7 150 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 CARD6Q9BX69 1037 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 GSDMCQ9BYG8 508 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 ZDHHC3Q9NYG2 299 aa25.23■■□□□ 1.63
SMAD6-202ENST00000557916 PLEKHM1Q9Y4G2 1056 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms