RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TSSK1BQ9BXA7 367 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 CPEB1Q9BZB8 566 aaKnown RBP7.34□□□□□ -1.23
SPG11-204ENST00000557866 GPR63Q9BZJ6 419 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 UNKQ9C0B0 810 aaKnown RBP7.34□□□□□ -1.23
SPG11-204ENST00000557866 S1PR5Q9H228 398 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 NSUN3Q9H649 340 aaKnown RBP7.34□□□□□ -1.23
SPG11-204ENST00000557866 NMRAL1Q9HBL8 299 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 ABCF3Q9NUQ8 709 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 OBP2AQ9NY56 170 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 TLK1Q9UKI8 766 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 CDH7Q9ULB5 785 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 SLC27A6Q9Y2P4 619 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 CRYL1Q9Y2S2 319 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 ARL2BPQ9Y2Y0 163 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 ACOT9Q9Y305 439 aa7.34□□□□□ -1.23
SPG11-204ENST00000557866 MYLKQ15746 1914 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 SPTBN5Q9NRC6 3674 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 C1orf232A0A0U1RR37 186 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 NPIPB15A6NHN6 443 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 A8MX80 341 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 OR1I1O60431 355 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 TULP3O75386 442 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 LYPLA1O75608 230 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 NFATC1O95644 943 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 SERPINE1P05121 402 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 RPLP1P05386 114 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 UGT2B4P06133 528 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 CTSLP07711 333 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 DLDP09622 509 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 BPIP17213 487 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 LHCGRP22888 699 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 PMLP29590 882 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 SERPINA4P29622 427 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 FMO4P31512 558 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 HMGCLP35914 325 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 GLRBP48167 497 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 KCNC1P48547 511 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ITGA9Q13797 1035 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 FAM45BPQ6NSW5 357 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 NAPRTQ6XQN6 538 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 SDCCAG8Q86SQ7 713 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 SPATS2Q86XZ4 545 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 FSTL5Q8N475 847 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 ANKS4BQ8N8V4 417 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 FAM45AQ8TCE6 357 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 CCT6BQ92526 530 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 MOCOSQ96EN8 888 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 CHFRQ96EP1 664 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 UBXN10Q96LJ8 280 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 C7orf26Q96N11 449 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ZNF641Q96N77 438 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 BIRC8Q96P09 236 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 MCCC1Q96RQ3 725 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 SORT1Q99523 831 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 RPP25Q9BUL9 199 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 GATA5Q9BWX5 397 aaPredicted RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 ZDHHC6Q9H6R6 413 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ECT2Q9H8V3 914 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 KCNK13Q9HB14 408 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ZFYVE1Q9HBF4 777 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 NPHS2Q9NP85 383 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 IL26Q9NPH9 171 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ACSS2Q9NR19 701 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 INTS10Q9NVR2 710 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 THAP1Q9NVV9 213 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 ELOVL2Q9NXB9 296 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 KLHL14Q9P2G3 628 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 CPSF2Q9P2I0 782 aaKnown RBP7.33□□□□□ -1.24
SPG11-204ENST00000557866 GALPQ9UBC7 116 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 XPR1Q9UBH6 696 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 NUMBLQ9Y6R0 609 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 TRANK1O15050 2925 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 PDE4DIPQ5VU43 2346 aa7.33□□□□□ -1.24
SPG11-204ENST00000557866 PRRC2BQ5JSZ5 2229 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 ATXN2Q99700 1313 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 TSPAN11A1L157 253 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 DLX3O60479 287 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TRIM13O60858 407 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 TBX10O75333 385 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 LEFTY1O75610 366 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 SRP72O76094 671 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 TGDSO95455 350 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 APOA4P06727 396 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 SRPRAP08240 638 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 C1SP09871 688 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 LTA4HP09960 611 aaKnown RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 CCDC166P0CW27 439 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 RALBP11234 206 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 HOXB8P17481 243 aaPredicted RBP7.32□□□□□ -1.24
SPG11-204ENST00000557866 KCNA5P22460 613 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 OPRD1P41143 372 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CCR10P46092 362 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 SLC1A6P48664 564 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CACNG1Q06432 222 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 FCHO2Q0JRZ9 810 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CSHL1Q14406 222 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 GRM2Q14416 872 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 PDGFRLQ15198 375 aa7.32□□□□□ -1.24
SPG11-204ENST00000557866 CHRNA6Q15825 494 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms