RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ATG9AQ7Z3C6 839 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 EPHX4Q8IUS5 362 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 MAP7D3Q8IWC1 876 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 NAXEQ8NCW5 288 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 OR52I2Q8NH67 350 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 FRAT1Q92837 279 aaPredicted RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 ZKSCAN4Q969J2 545 aaPredicted RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 FAM149B1Q96BN6 582 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 MAP7D2Q96T17 732 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 PDCL3Q9H2J4 239 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 OR14J1Q9UGF5 321 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 ERRFI1Q9UJM3 462 aaPredicted RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 KCNE2Q9Y6J6 123 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 FAM90A26D6RGX4 464 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 DVL1O14640 695 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 HS3ST1O14792 307 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 ANKRD28O15084 1053 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CREB3O43889 395 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 TBX18O95935 607 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CLEC3BP05452 202 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CFC1P0CG37 223 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 FGF5P12034 268 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 NR1D1P20393 614 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 UBA1P22314 1058 aaKnown RBP4.75□□□□□ -1.65
GPHN-215ENST00000557654 ELF1P32519 619 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 UBA7P41226 1012 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 DVL1P1P54792 670 aaPredicted RBP4.75□□□□□ -1.65
GPHN-215ENST00000557654 MAD2L1Q13257 205 aaPredicted RBP4.75□□□□□ -1.65
GPHN-215ENST00000557654 RALBP1Q15311 655 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 MED22Q15528 200 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 LRIF1Q5T3J3 769 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 JAKMIP3Q5VZ66 844 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CPLX4Q7Z7G2 160 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 NFE4Q86UQ8 179 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 KLHDC8BQ8IXV7 354 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 EXOC6Q8TAG9 804 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 ETNPPLQ8TBG4 499 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 RFFLQ8WZ73 363 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 ARHGEF26Q96DR7 871 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 LINGO1Q96FE5 620 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 PKNOX2Q96KN3 472 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 PPM1MQ96MI6 270 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 LIMA1Q9UHB6 759 aaKnown RBP4.75□□□□□ -1.65
GPHN-215ENST00000557654 TMEM98Q9Y2Y6 226 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 PIAS3Q9Y6X2 628 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 KIF21AQ7Z4S6 1674 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 CTTNBP2Q8WZ74 1663 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 ABCA10Q8WWZ4 1543 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 KIF15Q9NS87 1388 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 PLEKHH2Q8IVE3 1493 aa4.75□□□□□ -1.65
GPHN-215ENST00000557654 UHRF1BP1Q6BDS2 1440 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 CYSRT1A8MQ03 144 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 EIF3DO15371 548 aaKnown RBP eCLIP4.74□□□□□ -1.65
GPHN-215ENST00000557654 FAM106CPP0CH98 169 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 CD53P19397 219 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 KRT9P35527 623 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 TIMP3P35625 211 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 RBM39Q14498 530 aaKnown RBP4.74□□□□□ -1.65
GPHN-215ENST00000557654 KRTCAP3Q53RY4 240 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 NSUN5P2Q63ZY6 315 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 GSG1LQ6UXU4 331 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 SDCCAG8Q86SQ7 713 aaPredicted RBP4.74□□□□□ -1.65
GPHN-215ENST00000557654 FRMD1Q8N878 549 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 LRRC1Q9BTT6 524 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 KLHL9Q9P2J3 617 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 STK39Q9UEW8 545 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 R3HDM2Q9Y2K5 976 aaKnown RBP4.74□□□□□ -1.65
GPHN-215ENST00000557654 GAPVD1Q14C86 1478 aa4.74□□□□□ -1.65
GPHN-215ENST00000557654 SMCHD1A6NHR9 2005 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 KDM6BO15054 1643 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 KIF14Q15058 1648 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 ZCWPW2A0A1B0GU75 182 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 A0A1W2PP11 408 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 CTAGE9A4FU28 777 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 JRKO75564 520 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 SLC25A12O75746 678 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 IPO7O95373 1038 aaKnown RBP4.73□□□□□ -1.65
GPHN-215ENST00000557654 PAK4O96013 591 aaPredicted RBP4.73□□□□□ -1.65
GPHN-215ENST00000557654 ICAM1P05362 532 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 CTAGE8P0CG41 777 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 UGT1A1P22309 533 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 BSGP35613 385 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 GLIPR1P48060 266 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 PNLIPRP3Q17RR3 467 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 ZNF805Q5CZA5 627 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 PDSS1Q5T2R2 415 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 PLA2G4FQ68DD2 849 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 PAPD4Q6PIY7 484 aaKnown RBP4.73□□□□□ -1.65
GPHN-215ENST00000557654 SEPT14Q6ZU15 432 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 CTAGE4Q8IX94 777 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 ADSSL1Q8N142 457 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 METTL27Q8N6F8 245 aaPredicted RBP4.73□□□□□ -1.65
GPHN-215ENST00000557654 OR1J2Q8NGS2 313 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 THAP6Q8TBB0 222 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 HM13Q8TCT9 377 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 EGLN2Q96KS0 407 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 NEUROD6Q96NK8 337 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 NEURL2Q9BR09 285 aa4.73□□□□□ -1.65
GPHN-215ENST00000557654 SCRT2Q9NQ03 307 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms