RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 LRFN5Q96NI6 719 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 IP6K3Q96PC2 410 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 CPXM1Q96SM3 734 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 ZNF559Q9BR84 538 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 TRIM56Q9BRZ2 755 aaKnown RBP9.23□□□□□ -0.93
NEDD1-211ENST00000557454 MAGEH1Q9H213 219 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 UCK1Q9HA47 277 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 P4HTMQ9NXG6 502 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 PLEKHA6Q9Y2H5 1048 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 COQ4Q9Y3A0 265 aa9.23□□□□□ -0.93
NEDD1-211ENST00000557454 SLC19A2O60779 497 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 ALOX12BO75342 701 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SOD1P00441 154 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 IGHEP01854 428 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 ACP5P13686 325 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 MST1P26927 711 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TEAD1P28347 426 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SCNN1AP37088 669 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SOX8P57073 446 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 MCCD1P59942 119 aaPredicted RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TUBB4BP68371 445 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TUBB2AQ13885 445 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 GRM3Q14832 879 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 CYTH1Q15438 398 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 NFIL3Q16649 462 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 INO80DQ53TQ3 878 aaPredicted RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 DCAF17Q5H9S7 520 aaPredicted RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TCERG1LQ5VWI1 586 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 RWDD4Q6NW29 188 aaKnown RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 RPUSD3Q6P087 351 aaKnown RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TTC30BQ8N4P2 665 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 PAF1Q8N7H5 531 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 AVL9Q8NBF6 648 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 UBXN4Q92575 508 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 PLEKHG4BQ96PX9 1271 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TBCBQ99426 244 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 NPY6RQ99463 290 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 NDC1Q9BTX1 674 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TUBB2BQ9BVA1 445 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 MAGEF1Q9HAY2 307 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 PPP4R2Q9NY27 417 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SCHIP1Q9P0W5 487 aaPredicted RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 PPARGC1AQ9UBK2 798 aaKnown RBP9.22□□□□□ -0.93
NEDD1-211ENST00000557454 SEC14L3Q9UDX4 400 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 DOCK4Q8N1I0 1966 aa9.22□□□□□ -0.93
NEDD1-211ENST00000557454 TLCD2A6NGC4 264 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 INAFM1C9JVW0 142 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 KLF7O75840 302 aaPredicted RBP9.21□□□□□ -0.94
NEDD1-211ENST00000557454 SLCO2B1O94956 709 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 VIPP01282 170 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 JCHAINP01591 159 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 DNASE1P24855 282 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 SERPINA4P29622 427 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 GPR1P46091 355 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 RGRP47804 291 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ARL4DP49703 201 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 RBPJQ06330 500 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ABRQ12979 859 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PAK1Q13153 545 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PCOLCEQ15113 449 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ACBD5Q5T8D3 534 aaPredicted RBP9.21□□□□□ -0.94
NEDD1-211ENST00000557454 AGAP7PQ5VUJ5 663 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 SLC26A9Q7LBE3 791 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 HSD11B1LQ7Z5J1 315 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 TRIM48Q8IWZ4 208 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PPM1KQ8N3J5 372 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 OR1N1Q8NGS0 311 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 EPS8L1Q8TE68 723 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 CPT1BQ92523 772 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF501Q96CX3 271 aaPredicted RBP9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ECHDC3Q96DC8 303 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 CLIP3Q96DZ5 547 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
NEDD1-211ENST00000557454 AGAP4Q96P64 663 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 EPS8L2Q9H6S3 715 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 GPAMQ9HCL2 828 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PCMTD2Q9NV79 361 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 TMEM248Q9NWD8 314 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 SEMA5BQ9P283 1151 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 EPHA6Q9UF33 1036 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 NEU3Q9UQ49 428 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 PADI2Q9Y2J8 665 aa9.21□□□□□ -0.94
NEDD1-211ENST00000557454 ANK3Q12955 4377 aaKnown RBP9.21□□□□□ -0.94
NEDD1-211ENST00000557454 OR5K4A6NMS3 321 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 C9J4A7 227 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 POLR2DO15514 142 aaKnown RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 PROM1O43490 865 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 DNAJC6O75061 913 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 HEXIM1O94992 359 aaKnown RBP9.2□□□□□ -0.94
NEDD1-211ENST00000557454 ZWINTO95229 277 aa9.2□□□□□ -0.94
NEDD1-211ENST00000557454 ASMTLO95671 621 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms