RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 KLHL6Q8WZ60 621 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 NSMCE3Q96MG7 304 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 ERGIC2Q96RQ1 377 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 SRPK1Q96SB4 655 aaKnown RBP10.08□□□□□ -0.8
RDH11-210ENST00000557331 ZSCAN5AQ9BUG6 496 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 ADGRE3Q9BY15 652 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 BRD8Q9H0E9 1235 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 TRIM39Q9HCM9 518 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 SEMA5BQ9P283 1151 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 CD84Q9UIB8 345 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 RARRES3Q9UL19 164 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 POLQO75417 2590 aa10.08□□□□□ -0.8
RDH11-210ENST00000557331 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 KMOO15229 486 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 EML2O95834 649 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 CTPS1P17812 591 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 NELFEP18615 380 aaKnown RBP10.07□□□□□ -0.8
RDH11-210ENST00000557331 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
RDH11-210ENST00000557331 PTPN4P29074 926 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 CAPZBP47756 277 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 ZNF165P49910 485 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 UBXN1Q04323 297 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 PIGHQ14442 188 aaPredicted RBP10.07□□□□□ -0.8
RDH11-210ENST00000557331 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 ATP1A1-AS1Q5TC04 95 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 AGAP9Q5VTM2 703 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 CACHD1Q5VU97 1274 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 ABRAXAS1Q6UWZ7 409 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 SLC34A3Q8N130 599 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 TGM7Q96PF1 710 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 PLEKHG4BQ96PX9 1271 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 CD180Q99467 661 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 TIMM29Q9BSF4 260 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 TBC1D10AQ9BXI6 508 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 NT5MQ9NPB1 228 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 SLAMF7Q9NQ25 335 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 CNOT6Q9ULM6 557 aaKnown RBP10.07□□□□□ -0.8
RDH11-210ENST00000557331 KCNK6Q9Y257 313 aa10.07□□□□□ -0.8
RDH11-210ENST00000557331 MRPS18BQ9Y676 258 aaKnown RBP10.07□□□□□ -0.8
RDH11-210ENST00000557331 C1orf232A0A0U1RR37 186 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 WIPF3A6NGB9 483 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 ANKRD66B4E2M5 251 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 CHUKO15111 745 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 EPHB6O15197 1021 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 MATN3O15232 486 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 SORBS2O94875 1100 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 SLC25A14O95258 325 aaPredicted RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 ATP1A1P05023 1023 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 KLK3P07288 261 aaPredicted RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 PDHA1P08559 390 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 ZNF28P17035 718 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 MX2P20592 715 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 IDSP22304 550 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 CCNCP24863 283 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 LEPRP48357 1165 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 SEPHS1P49903 392 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 RRADP55042 308 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 GSDMDP57764 484 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 DCDC1P59894 354 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 MAXP61244 160 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 IFI16Q16666 785 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 ZNF569Q5MCW4 686 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 TRIM74Q86UV6 250 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 ARFGAP1Q8N6T3 406 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 TMEM102Q8N9M5 508 aaPredicted RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 SIDT2Q8NBJ9 832 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 PNPLA2Q96AD5 504 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 TSGA13Q96PP4 275 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 CSPG4P5Q96PW8 444 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 PEBP4Q96S96 227 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 MLPHQ9BV36 600 aaPredicted RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 TDRD1Q9BXT4 1180 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 ING2Q9H160 280 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 NUP62CLQ9H1M0 184 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 ACTL8Q9H568 366 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 PCDH9Q9HC56 1237 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 SYTL2Q9HCH5 934 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 SLC40A1Q9NP59 571 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
RDH11-210ENST00000557331 NFKBIL1Q9UBC1 381 aaPredicted RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 ANKRD17O75179 2603 aaKnown RBP10.06□□□□□ -0.8
RDH11-210ENST00000557331 SHANK1Q9Y566 2161 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 TTC24A2A3L6 582 aaPredicted RBP10.05□□□□□ -0.8
RDH11-210ENST00000557331 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 PDZK1P1A8MUH7 402 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 K7EM74 188 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
RDH11-210ENST00000557331 CEACAM4O75871 244 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 CLDN7O95471 211 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 JCHAINP01591 159 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 IGHEP01854 428 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 FTLP02792 175 aaPredicted RBP10.05□□□□□ -0.8
RDH11-210ENST00000557331 FURINP09958 794 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 TYRP1P17643 537 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 NR1D1P20393 614 aa10.05□□□□□ -0.8
RDH11-210ENST00000557331 CDK11BP21127 795 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms