RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 GPRC6AQ5T6X5 926 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 PTRHD1Q6GMV3 140 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 ERN2Q76MJ5 926 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 RBFAQ8N0V3 343 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 IL17RCQ8NAC3 791 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 CCDC197Q8NCU1 140 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 EXT2Q93063 718 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 C19orf43Q9BQ61 176 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 MRPL57Q9BQC6 102 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 MKRN2Q9H000 416 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 E5RI56 91 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 CDC7O00311 574 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 VPS26AO75436 327 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 TSPAN12O95859 305 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 SLC1A6P48664 564 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 ADARP55265 1226 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 CAMK2GQ13555 558 aaPredicted RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 ATG16L1Q676U5 607 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 NUDT18Q6ZVK8 323 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 RMDN2Q96LZ7 410 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 DYRK4Q9NR20 520 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 ZDHHC3Q9NYG2 299 aa13.68□□□□□ -0.22
EFCAB11-212ENST00000556639 PLXNA2O75051 1894 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 VCANP13611 3396 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 NEMP1O14524 444 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PFDN6O15212 129 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 TRIM13O60858 407 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 SERPINE1P05121 402 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 COPAP53621 1224 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 NAGLUP54802 743 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PTPN5P54829 565 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 DMTNQ08495 405 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 IFT88Q13099 833 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 ACAP2Q15057 778 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 CST6Q15828 149 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PIP5KL1Q5T9C9 394 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 KCNJ9Q92806 393 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PHF21BQ96EK2 531 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 COQ10AQ96MF6 247 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 SORT1Q99523 831 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 SHCBP1LQ9BZQ2 653 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 RSPH9Q9H1X1 276 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 TRMT6Q9UJA5 497 aaKnown RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 C1QTNF3-AMACRE9PGA6 284 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 INPP4BO15327 924 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 KLF8O95600 359 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 CHRNGP07510 517 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 C6P13671 934 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 HNRNPH2P55795 449 aaKnown RBP13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 TAS2R38P59533 333 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 TFF2Q03403 129 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 LCA5Q86VQ0 697 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 LINGO1Q96FE5 620 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PPP1R16AQ96I34 528 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 COPS8Q99627 209 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 POPDC3Q9HBV1 291 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
EFCAB11-212ENST00000556639 A0A1W2PP55 124 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 NPEPPSL1A6NEC2 478 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 EBAG9O00559 213 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 WNT9AO14904 365 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 SYNCRIPO60506 623 aaKnown RBP13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 APOA4P06727 396 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 RPS3P23396 243 aaKnown RBP eCLIP13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 NTSR1P30989 418 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 TSNQ15631 228 aaKnown RBP13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 HSF5Q4G112 596 aaPredicted RBP13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 C6orf89Q6UWU4 347 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 DSG4Q86SJ6 1040 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 BEND7Q8N7W2 519 aaPredicted RBP13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 AP2M1Q96CW1 435 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 DHRS7Q9Y394 339 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 FADS3Q9Y5Q0 445 aa13.66□□□□□ -0.22
EFCAB11-212ENST00000556639 LRRC14BA6NHZ5 514 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 A8MT66 165 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 UBXN8O00124 270 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 PYGLP06737 847 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 IL9P15248 144 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 FOSL2P15408 326 aa13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-212ENST00000556639 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms