RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PLEKHM1Q9Y4G2 1056 aa9.56□□□□□ -0.88
SRP54-210ENST00000556380 COL5A1P20908 1838 aaPredicted RBP9.56□□□□□ -0.88
SRP54-210ENST00000556380 IGF2RP11717 2491 aa9.56□□□□□ -0.88
SRP54-210ENST00000556380 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 TCRBV7S3A2A0A539 114 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PRR19A6NJB7 356 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 CHUKO15111 745 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 CRTAMO95727 393 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 KRT14P02533 472 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 APRTP07741 180 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ADRB1P08588 477 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 FTH1P19P0C7X4 201 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ALPPL2P10696 532 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 MYF5P13349 255 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 CTSEP14091 401 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ZNF8P17098 575 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 CKMT2P17540 419 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 TPSB2P20231 275 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ACP1P24666 158 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PMLP29590 882 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PTGIRP43119 386 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ACADVLP49748 655 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PDE1BQ01064 536 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 CDH17Q12864 832 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PEX6Q13608 980 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 TRIP13Q15645 432 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 TPSAB1Q15661 275 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 DEFB133Q30KQ1 61 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 CERCAMQ5T4B2 595 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ZCCHC8Q6NZY4 707 aaKnown RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 DOK6Q6PKX4 331 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ZNF534Q76KX8 674 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 C17orf82Q86X59 251 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 OR13C4Q8NGS5 318 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 ADAMTS14Q8WXS8 1223 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 SLCO2A1Q92959 643 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 APOLD1Q96LR9 279 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 RMI1Q9H9A7 625 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 CARS2Q9HA77 564 aaKnown RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 ARFGAP3Q9NP61 516 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 NLE1Q9NVX2 485 aaPredicted RBP9.55□□□□□ -0.88
SRP54-210ENST00000556380 PCYOX1Q9UHG3 505 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 FKBPLQ9UIM3 349 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 RIMKLBQ9ULI2 386 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PKP3Q9Y446 797 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 PCDHGA1Q9Y5H4 931 aa9.55□□□□□ -0.88
SRP54-210ENST00000556380 EPG5Q9HCE0 2579 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GPR89AB7ZAQ6 455 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 E7EVH7 732 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 H7C0S8 307 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GPR39O43194 453 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 NUAK1O60285 661 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 SRP72O76094 671 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 ASMTLO95671 621 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 ANXA6P08133 673 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GPR89BP0CG08 455 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 IVDP26440 423 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GNPDA1P46926 289 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 ARSDP51689 593 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 CDK16Q00536 496 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 CTBSQ01459 385 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GPS1Q13098 491 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 ILKQ13418 452 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 POU6F1Q14863 301 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 TCEA2Q15560 299 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 HS1BP3Q53T59 392 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 FAM151BQ6UXP7 276 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 MARK2Q7KZI7 788 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 CAND1Q86VP6 1230 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 GKN2Q86XP6 184 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 ZNF547Q8IVP9 402 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 SFTPA2Q8IWL1 248 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 SLC35F3Q8IY50 421 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 GPR156Q8NFN8 814 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 STYXQ8WUJ0 223 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 CPT1BQ92523 772 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 CDKN2AIPNLQ96HQ2 116 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 DNAJC1Q96KC8 554 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 CAPZA3Q96KX2 299 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 RANBP9Q96S59 729 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 OR2AG1Q9H205 316 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 SPATS2LQ9NUQ6 558 aaKnown RBP9.54□□□□□ -0.88
SRP54-210ENST00000556380 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 MOSPD1Q9UJG1 213 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 APPL1Q9UKG1 709 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 FRYQ5TBA9 3013 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 LRP4O75096 1905 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 SCN8AQ9UQD0 1980 aa9.54□□□□□ -0.88
SRP54-210ENST00000556380 TRBV5-4A0A0C4DH59 114 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 EME2A4GXA9 379 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms