RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 FLNCQ14315 2725 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 LOC101059948A0A1B0GTJ6 334 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 RGSL1A5PLK6 1076 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 AURKAO14965 403 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SLC25A14O95258 325 aaPredicted RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 MT-CYBP00156 380 aaPredicted RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 TMEM253P0C7T8 217 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 GFERP55789 205 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 UBE2IP63279 158 aaKnown RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 CHP1Q99653 195 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 HERPUD2Q9BSE4 406 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 ADGRE3Q9BY15 652 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 OSGEPL1Q9H4B0 414 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 HAUS2Q9NVX0 235 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 UBP1Q9NZI7 540 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 SLC30A1Q9Y6M5 507 aa13.11□□□□□ -0.31
TGFB3-204ENST00000556285 KIR2DS5A0A0G2JLQ3 304 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 A0A0G2JNG1 304 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 KIR2DS3K7RE56 304 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 APOL1O14791 398 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 TNNT1P13805 278 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 BPIP17213 487 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 TYRP1P17643 537 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 SLC19A1P41440 591 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 EPHA4P54764 986 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 RAB15P59190 212 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 DYNLT1P63172 113 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 TLE1Q04724 770 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 KIR2DS5Q14953 304 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 NOMO1Q15155 1222 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 LLGL1Q15334 1064 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 ATG14Q6ZNE5 492 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 NT5DC3Q86UY8 548 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF547Q8IVP9 402 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 NLGN4YQ8NFZ3 816 aaPredicted RBP13.1□□□□□ -0.31
TGFB3-204ENST00000556285 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 GLYATL1Q969I3 302 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 SH3KBP1Q96B97 665 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 EPN3Q9H201 632 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
TGFB3-204ENST00000556285 DNAJC16Q9Y2G8 782 aa13.1□□□□□ -0.31
TGFB3-204ENST00000556285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.1□□□□□ -0.31
TGFB3-204ENST00000556285 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 CHUKO15111 745 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 PPFIA2O75334 1257 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 PMPCBO75439 489 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 STK17BO94768 372 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 KRT1P04264 644 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 PRKAR1AP10644 381 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 SFTPCP11686 197 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 BRAFP15056 766 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF28P17035 718 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF7P17097 686 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 OAS2P29728 719 aaKnown RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 CA5AP35218 305 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 LEPRP48357 1165 aaKnown RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 CLCNKAP51800 687 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 POLE2P56282 527 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 DCDC1P59894 354 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 CDK18Q07002 472 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 KCNAB2Q13303 367 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 PDK1Q15118 436 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 PHYKPLQ8IUZ5 450 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 SLC25A51Q9H1U9 297 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 STN1Q9H668 368 aaKnown RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-204ENST00000556285 GLOD4Q9HC38 313 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
TGFB3-204ENST00000556285 SIDT1Q9NXL6 827 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms