RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 MERTKQ12866 999 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 SMAD1Q15797 465 aaKnown RBP10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 PPP1R3AQ16821 1122 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 UGT3A1Q6NUS8 523 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 CCDC60Q8IWA6 550 aaPredicted RBP10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 FAM110BQ8TC76 370 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 TESCQ96BS2 214 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 ZNF845Q96IR2 970 aaPredicted RBP10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 CCDC17Q96LX7 622 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 NACC1Q96RE7 527 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 CSF3RQ99062 836 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 RMND5AQ9H871 391 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 CRTAC1Q9NQ79 661 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 C1orf112Q9NSG2 853 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 COPG2Q9UBF2 871 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 FAM198AQ9UFP1 575 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 CNOT6Q9ULM6 557 aaKnown RBP10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 TCAF1Q9Y4C2 921 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 PSAT1Q9Y617 370 aa10.29□□□□□ -0.76
EFCAB11-208ENST00000555872 ACOD1A6NK06 481 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 C3orf70A6NLC5 250 aaPredicted RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 GPR25O00155 361 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 DLGAP1O14490 977 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 GLRA3O75311 464 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 IL18RAPO95256 599 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SCGB1D2O95969 90 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 APOC1P02654 83 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ALDOAP04075 364 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SRCP12931 536 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 EEF1B2P24534 225 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RPL35P42766 123 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RAD52P43351 418 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PRKAA2P54646 552 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 CXCL9Q07325 125 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TOR2AQ5JU69 321 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 DARS2Q6PI48 645 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PLEKHG7Q6ZR37 379 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ERMP1Q7Z2K6 904 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ASPGQ86U10 573 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SLC22A16Q86VW1 577 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PDPRQ8NCN5 879 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 Q8NFD4 153 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 OR13F1Q8NGS4 319 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 MOCOSQ96EN8 888 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PKP4Q99569 1192 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RIT2Q99578 217 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 IL12RB2Q99665 862 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ACSS2Q9NR19 701 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ZNF358Q9NW07 568 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TMEM216Q9P0N5 145 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RAD17O75943 681 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 APRTP07741 180 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 HBQ1P09105 142 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 GNA15P30679 374 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 EPHX2P34913 555 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 C6orf10Q5SRN2 563 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 GARNL3Q5VVW2 1013 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 BBS12Q6ZW61 710 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 PHF13Q86YI8 300 aaPredicted RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RFX6Q8HWS3 928 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 UNC5BQ8IZJ1 945 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 ABRAQ8N0Z2 381 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TDRD5Q8NAT2 981 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SRFBP1Q8NEF9 429 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 TRPM4Q8TD43 1214 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 AHCYL2Q96HN2 611 aaKnown RBP10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 SLC9A2Q9UBY0 812 aa10.28□□□□□ -0.76
EFCAB11-208ENST00000555872 RNF103-CHMP3A0A140T963 221 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 FAM149AA5PLN7 773 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 SLC15A5A6NIM6 579 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 FZD9O00144 591 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 EPOP01588 193 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 PGRP06401 933 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 NFICP08651 508 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 NOS3P29474 1203 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 SERPINB1P30740 379 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 SLC7A1P30825 629 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 GP5P40197 560 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 SOX9P48436 509 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 STARP49675 285 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 PLCL1Q15111 1095 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 DNAJC24Q6P3W2 148 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 TMEM270Q6UE05 265 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 PRR23BQ6ZRT6 265 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 NUP54Q7Z3B4 507 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 DNAAF3Q8N9W5 541 aa10.27□□□□□ -0.76
EFCAB11-208ENST00000555872 ZFP90Q8TF47 636 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms