RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PACS1Q6VY07 963 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 ZNF514Q96K75 400 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-221ENST00000555773 LGR4Q9BXB1 951 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 PPCSQ9HAB8 311 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 GPR27Q9NS67 375 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 IL1RAPL1Q9NZN1 696 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 FETUBQ9UGM5 382 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 CA5BQ9Y2D0 317 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 PCDHGA5Q9Y5G8 931 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 R4GN57 208 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 UQCRHLA0A096LP55 91 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PRMT5O14744 637 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 GPR39O43194 453 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 ASMTLO95671 621 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 AHSGP02765 367 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 UQCRHP07919 91 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 NUDT17P0C025 328 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PRSS56P0CW18 603 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 ATP1B2P14415 290 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 RPS3P23396 243 aaKnown RBP eCLIP12.33□□□□□ -0.446e-7■■□□□ 13.4
SHMT2-221ENST00000555773 CA5AP35218 305 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SLC1A2P43004 574 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 MARK2Q7KZI7 788 aaKnown RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 ADGRG6Q86SQ4 1221 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 OR13H1Q8NG92 308 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PIGKQ92643 395 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SCARF2Q96GP6 870 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 WDR92Q96MX6 357 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 CPNE1Q99829 537 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 CLPBQ9H078 707 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SMYD2Q9NRG4 433 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 GPR34Q9UPC5 381 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SLC17A4Q9Y2C5 497 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
SHMT2-221ENST00000555773 DNMT3AQ9Y6K1 912 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-221ENST00000555773 SDK1Q7Z5N4 2213 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 H3BMM5 538 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CHUKO15111 745 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 NUAK1O60285 661 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 TCEA3O75764 348 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 HAUS5O94927 633 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 EPN2O95208 641 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 ESR1P03372 595 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 WNT1P04628 370 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CEACAM5P06731 702 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 IVLP07476 585 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 GSTM1P09488 218 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 AKT1P31749 480 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 GP5P40197 560 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CD151P48509 253 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CSNK1EP49674 416 aaKnown RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 CSE1LP55060 971 aaKnown RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 C21orf59P57076 290 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 B4GALNT1Q00973 533 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 GSTM4Q03013 218 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 GTF2H3Q13889 308 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 LAIR1Q6GTX8 287 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 ENPP7Q6UWV6 458 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 MACC1Q6ZN28 852 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 STRA8Q7Z7C7 330 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 LDB1Q86U70 411 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 UHMK1Q8TAS1 419 aaKnown RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 LPGAT1Q92604 370 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 OR2AG1Q9H205 316 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 ERVMER34-1Q9H9K5 563 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 ATXN10Q9UBB4 475 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 TMEM98Q9Y2Y6 226 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 OAS3Q9Y6K5 1087 aaKnown RBP12.32□□□□□ -0.44
SHMT2-221ENST00000555773 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
SHMT2-221ENST00000555773 EXOC1LA0A1B0GW35 172 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 TMEM202A6NGA9 273 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 OR1I1O60431 355 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KCNJ13O60928 360 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 MTX2O75431 263 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 RETP07949 1114 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 OR56A5P0C7T3 313 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms