RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 UGT1A3P35503 534 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A5P35504 534 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 OR1D5P58170 312 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 PEX6Q13608 980 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 NR1D2Q14995 579 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 SIX1Q15475 284 aaPredicted RBP20.25■□□□□ 0.83
VTI1B-205ENST00000555543 TAF1AQ15573 450 aaPredicted RBP20.25■□□□□ 0.83
VTI1B-205ENST00000555543 PARP6Q2NL67 630 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 PLA2G4EQ3MJ16 856 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 ZDHHC20Q5W0Z9 365 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 ZNF547Q8IVP9 402 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 SFRP1Q8N474 314 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 OR4K2Q8NGD2 314 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 DTX3LQ8TDB6 740 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 SLC37A2Q8TED4 501 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UBE2Q2Q8WVN8 375 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 C1orf54Q8WWF1 131 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 PPP1R2P1Q96PQ5 205 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 TLR10Q9BXR5 811 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A7Q9HAW7 530 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A10Q9HAW8 530 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A8Q9HAW9 530 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 ARNT2Q9HBZ2 717 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 SLC23A2Q9UGH3 650 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 ZFYVE26Q68DK2 2539 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 GPR89AB7ZAQ6 455 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 GPR89BP0CG08 455 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 LPOP22079 712 aaPredicted RBP20.24■□□□□ 0.83
VTI1B-205ENST00000555543 LSSP48449 732 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 GDAP1Q8TB36 358 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 GRAMD1AQ96CP6 724 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 PRR11Q96HE9 360 aaPredicted RBP20.24■□□□□ 0.83
VTI1B-205ENST00000555543 FKBPLQ9UIM3 349 aa20.24■□□□□ 0.83
VTI1B-205ENST00000555543 URB1O60287 2271 aaKnown RBP20.24■□□□□ 0.83
VTI1B-205ENST00000555543 UNC13CQ8NB66 2214 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 GOLGA6L3A6NEY3 463 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 NRDCO43847 1150 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 VEGFDO43915 354 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 SNX2O60749 519 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 PPFIA2O75334 1257 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 CDK14O94921 469 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 ALDH4A1P30038 563 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 ZNF140P52738 457 aaPredicted RBP20.23■□□□□ 0.83
VTI1B-205ENST00000555543 TBC1D25Q3MII6 688 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 AMZ1Q400G9 498 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 MICALCLQ6ZW33 695 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 PRUNE1Q86TP1 453 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 LRRTM4Q86VH4 590 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 DDHD1Q8NEL9 900 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 TRIM58Q8NG06 486 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 OR13C4Q8NGS5 318 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 BRSK1Q8TDC3 778 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 FRMD8P1Q9BZ68 369 aaPredicted RBP20.23■□□□□ 0.83
VTI1B-205ENST00000555543 RDH14Q9HBH5 336 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 EPB41L5Q9HCM4 733 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 ASCL3Q9NQ33 180 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 KLC4Q9NSK0 619 aa20.23■□□□□ 0.83
VTI1B-205ENST00000555543 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.23■□□□□ 0.83
VTI1B-205ENST00000555543 PRR19A6NJB7 356 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 C2orf81A6NN90 581 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 DXOO77932 396 aaKnown RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 PRAMEF1O95521 474 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 AP2A1O95782 977 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 FASLGP48023 281 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 INHBCP55103 352 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 TMEM115Q12893 351 aaPredicted RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 BIRC2Q13490 618 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 SNX1Q13596 522 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 INSCQ1MX18 579 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 P3H1Q32P28 736 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 GPRC6AQ5T6X5 926 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 IYDQ6PHW0 289 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 C11orf96Q7Z7L8 435 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 ZNF761Q86XN6 746 aaPredicted RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 SLITRK4Q8IW52 837 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 GLIS1Q8NBF1 620 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 SNIP1Q8TAD8 396 aaKnown RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 LIN37Q96GY3 246 aaPredicted RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 NUDT22Q9BRQ3 303 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 OSGEPL1Q9H4B0 414 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 LRRC40Q9H9A6 602 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 PRDM8Q9NQV8 689 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 SMOXQ9NWM0 555 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 PIH1D1Q9NWS0 290 aaKnown RBP20.22■□□□□ 0.83
VTI1B-205ENST00000555543 DNAJC16Q9Y2G8 782 aa20.22■□□□□ 0.83
VTI1B-205ENST00000555543 CCDC187A0A096LP49 1063 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 CCL22O00626 93 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 KMOO15229 486 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 LDB2O43679 373 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 IFNB1P01574 187 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 F3P13726 295 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 ZNF7P17097 686 aaPredicted RBP20.21■□□□□ 0.83
VTI1B-205ENST00000555543 CCKBRP32239 447 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 CLCNKAP51800 687 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 CTSCP53634 463 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 XIAPP98170 497 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 ZFP36L1Q07352 338 aaKnown RBP20.21■□□□□ 0.83
VTI1B-205ENST00000555543 ITGA9Q13797 1035 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 MAP9Q49MG5 647 aa20.21■□□□□ 0.83
VTI1B-205ENST00000555543 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms