RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 THAP6Q8TBB0 222 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 DUSP19Q8WTR2 217 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 RHBDF1Q96CC6 855 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 DDOQ99489 341 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 SEMA3CQ99985 751 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 NTPCRQ9BSD7 190 aaKnown RBP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 SPRY4Q9C004 299 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 SPATC1LQ9H0A9 340 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 RAD21L1Q9H4I0 556 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 RABEP2Q9H5N1 569 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 IGLV5-52A0A0A0MRZ9 124 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 FAM90A26D6RGX4 464 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 UBE2CO00762 179 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCNK5O95279 499 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 BMP15O95972 392 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 GJA1P17302 382 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 SIRPAP78324 504 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 BNC1Q01954 994 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 SYT16Q17RD7 645 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF260Q3ZCT1 412 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 ERMARDQ5T6L9 678 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZDHHC20Q5W0Z9 365 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 C18orf63Q68DL7 685 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 CLIP4Q8N3C7 705 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 SLC38A9Q8NBW4 561 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 PHF21BQ96EK2 531 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 QRFPRQ96P65 431 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 DGAT2Q96PD7 388 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 MTERF1Q99551 399 aaKnown RBP5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 CMKLR1Q99788 373 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 AP1M1Q9BXS5 423 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 SEZ6LQ9BYH1 1024 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 SLCO5A1Q9H2Y9 848 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCNK15Q9H427 330 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 CHMP1AQ9HD42 196 aaPredicted RBP5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 WNT16Q9UBV4 365 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 HACL1Q9UJ83 578 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 ANAPC2Q9UJX6 822 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 KLHL20Q9Y2M5 609 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 TRPV2Q9Y5S1 764 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 NFS1Q9Y697 457 aa5.34□□□□□ -1.55
CKS1BP1-201ENST00000555221 TTC3P53804 2025 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 TCRBV21S2A2A0A5A6 115 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 MAGEB17A8MXT2 336 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 CLGNO14967 610 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PLPP2O43688 288 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 APOA4P06727 396 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 UBXN2AP68543 259 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PDE1BQ01064 536 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 DDR1Q08345 913 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PSMD6Q15008 389 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 KYNUQ16719 465 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 MEP1AQ16819 746 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 C9orf47Q6ZRZ4 202 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 INTS8Q75QN2 995 aaKnown RBP5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PM20D2Q8IYS1 436 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PGBD5Q8N414 524 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 GCSAMQ8N6F7 178 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 UTP15Q8TED0 518 aaKnown RBP5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 LPGAT1Q92604 370 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PTERQ96BW5 349 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 RADILQ96JH8 1075 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 CDRT15Q96T59 188 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 CSF3RQ99062 836 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 CCDC106Q9BWC9 280 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 TAS2R14Q9NYV8 317 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 C1RLQ9NZP8 487 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 BCCIPQ9P287 314 aaKnown RBP eCLIP5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 WBP11Q9Y2W2 641 aaKnown RBP5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 AMDHD2Q9Y303 409 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
CKS1BP1-201ENST00000555221 H0YIN7 160 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 IPO8O15397 1037 aaKnown RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 NDUFS4O43181 175 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 DDNO94850 711 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 NR2F2P24468 414 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 HRH2P25021 359 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 HOXA11P31270 313 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 CLDN20P56880 219 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 SNTB1Q13884 538 aaKnown RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 TCP11X2Q5H9J9 407 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 TSPAN14Q8NG11 270 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 TANKQ92844 425 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 MIB2Q96AX9 1013 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 PGAP3Q96FM1 320 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 C3orf30Q96M34 536 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 SMC6Q96SB8 1091 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 HGH1Q9BTY7 390 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 OR10A4Q9H209 315 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 CCDC177Q9NQR7 707 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 GDE1Q9NZC3 331 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 SMARCAL1Q9NZC9 954 aa5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 LARSQ9P2J5 1176 aaKnown RBP5.32□□□□□ -1.56
CKS1BP1-201ENST00000555221 PADI3Q9ULW8 664 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms