RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CPB1P15086 417 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ATF2P15336 505 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 AMPD1P23109 780 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DDX6P26196 483 aaKnown RBP eCLIP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GPR3P46089 330 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GABRB2P47870 512 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KCNJ1P48048 391 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KCNC1P48547 511 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF81P51508 661 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DNA2P51530 1060 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF75DP51815 510 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GPX6P59796 221 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 EEF1A1P68104 462 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RNF4P78317 190 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ASIC1P78348 528 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CSTF1Q05048 431 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 EEF1A2Q05639 463 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 HSPA14Q0VDF9 509 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SMARCB1Q12824 385 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PEX6Q13608 980 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DDX39BQ13838 428 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ARHGAP19Q14CB8 494 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RPS6KA2Q15349 733 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SF1Q15637 639 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CEBPEQ15744 281 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DPCR1Q3MIW9 517 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PABPC1LQ4VXU2 614 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PLA1AQ53H76 456 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TDRD12Q587J7 1177 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 Q5PR19 223 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 THEMIS2Q5TEJ8 643 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LIN9Q5TKA1 542 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LCN1P1Q5VSP4 162 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 EEF1A1P5Q5VTE0 462 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CASC4Q6P4E1 433 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LYPD8Q6UX82 237 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CHSY3Q70JA7 882 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 H1FNTQ75WM6 255 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CACNA2D4Q7Z3S7 1137 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 REC114Q7Z4M0 266 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TAF8Q7Z7C8 310 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LRRC6Q86X45 466 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KSR1Q8IVT5 923 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 REXO1L1PQ8IX06 675 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 HDDC3Q8N4P3 179 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CSGALNACT2Q8N6G5 542 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SNX31Q8N9S9 440 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RNF149Q8NC42 400 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GLIS3Q8NEA6 775 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TTLQ8NG68 377 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ITFG1Q8TB96 612 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 STT3BQ8TCJ2 826 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SLC26A7Q8TE54 656 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SMARCD2Q92925 531 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RAB24Q969Q5 203 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MTFMTQ96DP5 389 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MVB12AQ96EY5 273 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PGAP3Q96FM1 320 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MED30Q96HR3 178 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SUSD3Q96L08 255 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CGRRF1Q99675 332 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PLA2G2FQ9BZM2 168 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 FOXQ1Q9C009 403 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GOLPH3LQ9H4A5 285 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PCDHB16Q9NRJ7 776 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ASNSD1Q9NWL6 643 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 HACD3Q9P035 362 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 IFNKQ9P0W0 207 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CFAP97Q9P2B7 532 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 NCDNQ9UBB6 729 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SPASTQ9UBP0 616 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 EBF1Q9UH73 591 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TUBD1Q9UJT1 453 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KCND3Q9UK17 655 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 VANGL2Q9ULK5 521 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TFR2Q9UP52 801 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GINS2Q9Y248 185 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SAMM50Q9Y512 469 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LRRD1A4D1F6 860 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 BTBD17A6NE02 478 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 EREGO14944 169 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 KHNYNO15037 678 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 AKR7A2O43488 359 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NDUFS6O75380 124 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TADA2AO75478 443 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GMNNO75496 209 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CDC123O75794 336 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJB5O75953 348 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SPDEFO95238 335 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PGLSO95336 258 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 POMCP01189 267 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PIGRP01833 764 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 RHOP08100 348 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CHRM5P08912 532 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GAAP10253 952 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ERVK-10P10266 1014 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 RALAP11233 206 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 IDO1P14902 403 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms