RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PIGHQ14442 188 aaPredicted RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 ZNF273Q14593 569 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 SMTNL2Q2TAL5 461 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 OTUD3Q5T2D3 398 aaPredicted RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 CFAP77Q6ZQR2 320 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 TLK2Q86UE8 772 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 RFX6Q8HWS3 928 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 BBS7Q8IWZ6 715 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 DAW1Q8N136 415 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 YIPF7Q8N8F6 280 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 ZNF557Q8N988 423 aaPredicted RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 KDM1BQ8NB78 822 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 UFD1Q92890 307 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 REPS1Q96D71 796 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 CDCA5Q96FF9 252 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 PDXPQ96GD0 296 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 TEKT5Q96M29 485 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 RDH12Q96NR8 316 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 SLC25A23Q9BV35 468 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 AMBRA1Q9C0C7 1298 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 ZBTB20Q9HC78 741 aaPredicted RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 C14orf119Q9NWQ9 140 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 MTMR4Q9NYA4 1195 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 BFARQ9NZS9 450 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 CCDC59Q9P031 241 aaKnown RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 ERVK-18Q9QC07 812 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 ELF5Q9UKW6 265 aaPredicted RBP9.49□□□□□ -0.89
SIX4-202ENST00000554079 TRAPPC4Q9Y296 219 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 HES2Q9Y543 173 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 ACTL7AQ9Y615 435 aa9.49□□□□□ -0.89
SIX4-202ENST00000554079 TRAV6A0A075B6T7 132 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ATP6AP2A0A1C7CYW4 349 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 E5RI56 91 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PRSS44E7EML9 344 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PTGES3LE9PB15 166 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 K7ENM7 598 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ANGPT2O15123 496 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PRSS23O95084 383 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ALPPP05187 535 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ARSAP15289 507 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ALAS2P22557 587 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PIGAP37287 484 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 GRIA4P48058 902 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 SCNN1GP51170 649 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ISL1P61371 349 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 CYP51A1Q16850 503 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ASPRV1Q53RT3 343 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 LIPMQ5VYY2 423 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 TIGD7Q6NT04 549 aaPredicted RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 PHC2Q8IXK0 858 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ZNF366Q8N895 744 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ST13P5Q8NFI4 369 aaPredicted RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 OR8K5Q8NH50 307 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 OR8K3Q8NH51 312 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 MCOLN3Q8TDD5 553 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 FBLIM1Q8WUP2 373 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ST8SIA4Q92187 359 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 AKAP1Q92667 903 aaKnown RBP eCLIP9.48□□□□□ -0.89
SIX4-202ENST00000554079 ROPN1LQ96C74 230 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 TRMT61AQ96FX7 289 aaKnown RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 SCYL1Q96KG9 808 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 B3GALT6Q96L58 329 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 SEC22CQ9BRL7 303 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PI4K2AQ9BTU6 479 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 GTPBP2Q9BX10 602 aaKnown RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 PITHD1Q9GZP4 211 aaPredicted RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 DNAI2Q9GZS0 605 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 TMEM168Q9H0V1 697 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 CCDC167Q9P0B6 97 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 RAPGEFL1Q9UHV5 662 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 KLHL21Q9UJP4 597 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 MFHAS1Q9Y4C4 1052 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 TMEM233B4DJY2 109 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 TBC1D4O60343 1298 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 FZD6O60353 706 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
SIX4-202ENST00000554079 DFNA5O60443 496 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PEX14O75381 377 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 MT-ND1P03886 318 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PROS1P07225 676 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 APRTP07741 180 aa9.48□□□□□ -0.89
SIX4-202ENST00000554079 PSMB9P28065 219 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms