RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CDKN2BP42772 138 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ARSDP51689 593 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 UBE2IP63279 158 aaKnown RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 CDK18Q07002 472 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TFDP2Q14188 446 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 LY6DQ14210 128 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 GALNT3Q14435 633 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 PRKD1Q15139 912 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TEX44Q53QW1 395 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF569Q5MCW4 686 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 DCAF12Q5T6F0 453 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 NKAIN2Q5VXU1 208 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 WASH2PQ6VEQ5 465 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 MARK2Q7KZI7 788 aaKnown RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 CHST15Q7LFX5 561 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TMTC1Q8IUR5 882 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 RCBTB1Q8NDN9 531 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 GPR26Q8NDV2 337 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 NKD1Q969G9 470 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 GLYATL1Q969I3 302 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 AGAP3Q96P47 875 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 PLEKHG4BQ96PX9 1271 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 VPS35Q96QK1 796 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 VAT1Q99536 393 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 CHP1Q99653 195 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ZPBPQ9BS86 351 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TIMM29Q9BSF4 260 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TRABDQ9H4I3 376 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 GLOD4Q9HC38 313 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 WASH6PQ9NQA3 447 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 FBXO8Q9NRD0 319 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ATXN10Q9UBB4 475 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 KCNK6Q9Y257 313 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF711Q9Y462 761 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 PCYT1BQ9Y5K3 369 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 B3GALT1Q9Y5Z6 326 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ANKRD12Q6UB98 2062 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 LOC285095A0A1B0GVY8 99 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 EFCAB7A8K855 629 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 KMOO15229 486 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SPOPO43791 374 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 LCA5LO95447 670 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 MT-CYBP00156 380 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 C9P02748 559 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF8P17098 575 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 BPIP17213 487 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 COMTP21964 271 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 PTPN3P26045 913 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A3P35503 534 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 CYLC1P35663 651 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 MC2RQ01718 297 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SRSF6Q13247 344 aaKnown RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 MAP7Q14244 749 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 GSE1Q14687 1217 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ODF2Q5BJF6 829 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TFDP3Q5H9I0 405 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 AGAP9Q5VTM2 703 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 CCDC70Q6NSX1 233 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 CEACAM20Q6UY09 585 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ADGRG6Q86SQ4 1221 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 VASH2Q86V25 355 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 LRRTM4Q86VH4 590 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 RFX6Q8HWS3 928 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 PLXDC1Q8IUK5 500 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 RBM12BQ8IXT5 1001 aaKnown RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 EXD3Q8N9H8 876 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TC2NQ8N9U0 490 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 BRSK1Q8TDC3 778 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TFB1MQ8WVM0 346 aaKnown RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 UBE2Q2Q8WVN8 375 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ART4Q93070 314 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 PMEPA1Q969W9 287 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 RNF25Q96BH1 459 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 EFHD1Q9BUP0 239 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SPATA16Q9BXB7 569 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SLC12A9Q9BXP2 914 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 GPR63Q9BZJ6 419 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SPRY4Q9C004 299 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 OR2AG1Q9H205 316 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 ADNPQ9H2P0 1102 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TRIT1Q9H3H1 467 aaKnown RBP6.52□□□□□ -1.37
SLIRP-203ENST00000554074 STARD5Q9NSY2 213 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SPTLC3Q9NUV7 552 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 POT1Q9NUX5 634 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 OCIAD1Q9NX40 245 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SLC39A1Q9NY26 324 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 HACD3Q9P035 362 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM9Q9P0T7 183 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 CPNE7Q9UBL6 633 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 FAM153AQ9UHL3 310 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 PILRAQ9UKJ1 303 aa6.52□□□□□ -1.37
SLIRP-203ENST00000554074 SHOC2Q9UQ13 582 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms