RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 Q6ZVL8 140 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 CMC1Q7Z7K0 106 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 ISCA2Q86U28 154 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 SLC22A9Q8IVM8 553 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 AADATQ8N5Z0 425 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 DENND6BQ8NEG7 585 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 FAM3CQ92520 227 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
PABPN1-203ENST00000553960 INPP5DQ92835 1189 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 GLYATL1Q969I3 302 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 CLDN23Q96B33 292 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 MRRFQ96E11 262 aaKnown RBP10.78□□□□□ -0.68
PABPN1-203ENST00000553960 COX14Q96I36 57 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 ELMO2Q96JJ3 720 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 TSNARE1Q96NA8 513 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 TRMOQ9BU70 441 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 PCED1AQ9H1Q7 454 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 MTG2Q9H4K7 406 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 SPATS2LQ9NUQ6 558 aaKnown RBP10.78□□□□□ -0.68
PABPN1-203ENST00000553960 PCMTD2Q9NV79 361 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 OXSMQ9NWU1 459 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 TMEM216Q9P0N5 145 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 SLC17A7Q9P2U7 560 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 GPR34Q9UPC5 381 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 PLXND1Q9Y4D7 1925 aa10.78□□□□□ -0.68
PABPN1-203ENST00000553960 TMEM114B3SHH9 223 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 GOLGA8RI6L899 631 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 BUD23O43709 281 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SGTAO43765 313 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 NUAK1O60285 661 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 EDF1O60869 148 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 KCNJ13O60928 360 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 RECQL5O94762 991 aaPredicted RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SOD1P00441 154 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SERPINE1P05121 402 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 RALBP11234 206 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CPA3P15088 417 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 DRD4P21917 467 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 MAGEA9P43362 315 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 RPS9P46781 194 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 NUMBP49757 651 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 DGKEP52429 567 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 RPS21P63220 83 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 OCRLQ01968 901 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 FZD5Q13467 585 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PCLAFQ15004 111 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PON2Q15165 354 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PTPRRQ15256 657 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PLEKHS1Q5SXH7 462 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 TMEM207Q6UWW9 146 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 FAM151BQ6UXP7 276 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PIWIL4Q7Z3Z4 852 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 TRIM69Q86WT6 500 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SPATS2Q86XZ4 545 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 MMAAQ8IVH4 418 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SLC41A1Q8IVJ1 513 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 GJD3Q8N144 294 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 PLD6Q8N2A8 252 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 FSTL5Q8N475 847 aaPredicted RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 FAM174AQ8TBP5 190 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CD200R1Q8TD46 325 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SREK1Q8WXA9 508 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CCT8L2Q96SF2 557 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 TSSK1BQ9BXA7 367 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 SLC13A1Q9BZW2 595 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 ZCCHC2Q9C0B9 1178 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 MKRN2Q9H000 416 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 NSRP1Q9H0G5 558 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 MANSC1Q9H8J5 431 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 RDH14Q9HBH5 336 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 BPIFA1Q9NP55 256 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 THAP1Q9NVV9 213 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 USP36Q9P275 1121 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CRLS1Q9UJA2 301 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CNOT6Q9ULM6 557 aaKnown RBP10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CRYL1Q9Y2S2 319 aa10.77□□□□□ -0.69
PABPN1-203ENST00000553960 CCDC78A2IDD5 438 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 CCL22O00626 93 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 CHUKO15111 745 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 LATO43561 262 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 BNIP3LO60238 219 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 TRIM13O60858 407 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 KERAO60938 352 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 GPC4O75487 556 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 OR56A5P0C7T3 313 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 C6P13671 934 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 ATP1B2P14415 290 aaPredicted RBP10.76□□□□□ -0.69
PABPN1-203ENST00000553960 HOXB2P14652 356 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 CD1DP15813 335 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 ATP5F1P24539 256 aaPredicted RBP10.76□□□□□ -0.69
PABPN1-203ENST00000553960 AOAHP28039 575 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 HOXA6P31267 233 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 PRLHRP49683 370 aa10.76□□□□□ -0.69
PABPN1-203ENST00000553960 RGS4P49798 205 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms