RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NR1H4Q96RI1 486 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ASCL2Q99929 193 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 LRMDAQ9H2I8 198 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 WASH6PQ9NQA3 447 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 TCP11L1Q9NUJ3 509 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ABI3Q9P2A4 366 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 UBA2Q9UBT2 640 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 STK39Q9UEW8 545 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 GJD2Q9UKL4 321 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 KCNK7Q9Y2U2 307 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 MAU2Q9Y6X3 613 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 POLA1P09884 1462 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SOGA1O94964 1423 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 FAM237AA0A1B0GTK4 181 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 PLEKHD1A6NEE1 506 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SEC14L2O76054 403 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 BAG4O95429 457 aaKnown RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 IL7RP16871 459 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 CHRNB4P30926 498 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ARCN1P48444 511 aaKnown RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 NR2C2P49116 596 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 RARSP54136 660 aaKnown RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 COG7P83436 770 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ZBED6P86452 979 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 RUNX1T1Q06455 604 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 PDE1CQ14123 709 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 WDR38Q5JTN6 314 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SLC9C2Q5TAH2 1124 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ZNF772Q68DY9 489 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 TSSK4Q6SA08 328 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 RAD9BQ6WBX8 426 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 MYPOPQ86VE0 399 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ADSSL1Q8N142 457 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 PPP4R1Q8TF05 950 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ARHGEF26Q96DR7 871 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 PPP1R13BQ96KQ4 1090 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 LRR1Q96L50 414 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 NEUROD6Q96NK8 337 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SLC52A3Q9NQ40 469 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 GGA3Q9NZ52 723 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 LUZP4Q9P127 313 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 DLGAP2Q9P1A6 1054 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 OR14J1Q9UGF5 321 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 MKLN1Q9UL63 735 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 ARHGAP26Q9UNA1 814 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 LRRFIP2Q9Y608 721 aaKnown RBP3.73□□□□□ -1.81
SCFD1-210ENST00000553693 CAPN7Q9Y6W3 813 aa3.73□□□□□ -1.81
SCFD1-210ENST00000553693 SYNJ1O43426 1573 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 ERCC6L2Q5T890 1561 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 A0A1W2PPI3 338 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 KANSL1LA0AUZ9 987 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 ERI2A8K979 691 aaKnown RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 TPD52L2O43399 206 aaKnown RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 JRKO75564 520 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 NKX2-2O95096 273 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 MCCP23508 829 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 EPHA8P29322 1005 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 DRG2P55039 364 aaKnown RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 TBX2Q13207 712 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 KIR2DS3Q14952 304 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 CCNG2Q16589 344 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 DPCR1Q3MIW9 517 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 ASPRV1Q53RT3 343 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 KRTCAP3Q53RY4 240 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 TECRLQ5HYJ1 363 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 TRPT1Q86TN4 253 aaKnown RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 APLFQ8IW19 511 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 OR14L1PQ8NHC6 308 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 UTP15Q8TED0 518 aaKnown RBP3.72□□□□□ -1.81
SCFD1-210ENST00000553693 SMARCE1Q969G3 411 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 FAM149B1Q96BN6 582 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 STRA6Q9BX79 667 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 TAS2R10Q9NYW0 307 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 PRDM2Q13029 1718 aa3.72□□□□□ -1.81
SCFD1-210ENST00000553693 KDM3AQ9Y4C1 1321 aa3.71□□□□□ -1.81
SCFD1-210ENST00000553693 A0A1W2PP11 408 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 EIF4E1BA6NMX2 242 aaKnown RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM178BH3BS89 294 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 CLIC2O15247 247 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 CIDEAO60543 219 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 HOXA13P31271 388 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 HOXC8P31273 242 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 ELF1P32519 619 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 HARS2P49590 506 aaKnown RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 ZRSR2Q15696 482 aaKnown RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 CDONQ4KMG0 1287 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 ZC2HC1BQ5TFG8 222 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 RBMS3Q6XE24 437 aaKnown RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 C15orf39Q6ZRI6 1047 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 PIWIL4Q7Z3Z4 852 aaKnown RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 LONP2Q86WA8 852 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 ESX1Q8N693 406 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 OR1J2Q8NGS2 313 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 MAGIXQ9H6Y5 334 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 C2CD2Q9Y426 696 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 JRKLQ9Y4A0 524 aa3.71□□□□□ -1.82
SCFD1-210ENST00000553693 SYNJ2O15056 1496 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms