RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TEAD2Q15562 447 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SMAD1Q15797 465 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SNCBQ16143 134 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 CARD16Q5EG05 197 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF789Q5FWF6 425 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ARL13AQ5H913 290 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 WASHC2DQ5SRD0 308 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 C22orf39Q6P5X5 142 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF549Q6P9A3 640 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TTC23LQ6PF05 361 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TPRG1Q6ZUI0 275 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 FRMD7Q6ZUT3 714 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SNX20Q7Z614 316 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ISCA2Q86U28 154 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 APCDD1Q8J025 514 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 RBFAQ8N0V3 343 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 CPSF7Q8N684 471 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF781Q8N8C0 355 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 WFDC5Q8TCV5 224 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 PPP2R3CQ969Q6 453 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 PLEKHG4BQ96PX9 1271 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 MCCC1Q96RQ3 725 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 NDNQ99608 321 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 BBS2Q9BXC9 721 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TBC1D10AQ9BXI6 508 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 C1QTNF3Q9BXJ4 246 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ERVK-6Q9BXR3 956 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 POMKQ9H5K3 350 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 COG4Q9H9E3 785 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TCF7L2Q9NQB0 619 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 NDE1Q9NXR1 346 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 NFKBIL1Q9UBC1 381 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TRMT6Q9UJA5 497 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 GNPTGQ9UJJ9 305 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 FBXO10Q9UK96 956 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 CDYLQ9Y232 598 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 MRPS23Q9Y3D9 190 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 UBA6A0AVT1 1052 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TSPAN11A1L157 253 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 OR51F1A6NGY5 319 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 E5RI56 91 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 QSOX1O00391 747 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CHUKO15111 745 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 KLK8O60259 260 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 PRMT3O60678 531 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 DIAPH2O60879 1101 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 VPS4BO75351 444 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF821O75541 412 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 LYPLA1O75608 230 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 MLYCDO95822 493 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 MT-CO1P00395 513 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 PIRTP0C851 137 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CBSLP0DN79 551 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 THRAP10827 490 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CYP2A6P11509 494 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TYRP14679 529 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 POLR2EP19388 210 aaKnown RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 EN2P19622 333 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CCND1P24385 295 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 HLA-FP30511 346 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 HNRNPH1P31943 449 aaKnown RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CBSP35520 551 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 IRS1P35568 1242 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 SPAM1P38567 509 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CCR2P41597 374 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 RGS4P49798 205 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 COPAP53621 1224 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 INHBCP55103 352 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 XIAPP98170 497 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 NFATC2Q13469 925 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 GPM6BQ13491 265 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 PEX6Q13608 980 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 SEMA3AQ14563 771 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF460Q14592 562 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 HERC3Q15034 1050 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 EIF4HQ15056 248 aaKnown RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CDKN3Q16667 212 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TTLL9Q3SXZ7 439 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 HSF5Q4G112 596 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 PREPLQ4J6C6 727 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ZRANB3Q5FWF4 1079 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 DGKKQ5KSL6 1271 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF678Q5SXM1 525 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 C6orf163Q5TEZ5 329 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 NAPRTQ6XQN6 538 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 LINC00114Q6XXX2 140 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TPGS1Q6ZTW0 290 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ALYREFQ86V81 257 aaKnown RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TMEM25Q86YD3 366 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 ADGRG2Q8IZP9 1017 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TEX9Q8N6V9 391 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 PAF1Q8N7H5 531 aa7.25□□□□□ -1.25
ATXN3-221ENST00000553498 TXNDC5Q8NBS9 432 aaKnown RBP7.25□□□□□ -1.25
ATXN3-221ENST00000553498 CEP70Q8NHQ1 597 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms