RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FGF10O15520 208 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 DNAJC6O75061 913 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PALMO75781 387 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 GYPCP04921 128 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 TPM1P09493 284 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 F3P13726 295 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 TNFAIP3P21580 790 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 MMP8P22894 467 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 GPR1P46091 355 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 SEPHS1P49903 392 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PAPOLAP51003 745 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 CCZ1BP86790 482 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 CCZ1P86791 482 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 NAA30Q147X3 362 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 KIR2DS5Q14953 304 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PTPRRQ15256 657 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 NAA35Q5VZE5 725 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 ZNF517Q6ZMY9 492 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 MARK2Q7KZI7 788 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PRSS42Q7Z5A4 293 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 NOP9Q86U38 636 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 GALNT13Q8IUC8 556 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 LRRC8AQ8IWT6 810 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 LZTR1Q8N653 840 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 GLIS1Q8NBF1 620 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 MSANTD4Q8NCY6 345 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 FNIP1Q8TF40 1166 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PCSK5Q92824 1860 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 ELMO2Q96JJ3 720 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PSKH2Q96QS6 385 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 MCCC1Q96RQ3 725 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 PDCL3Q9H2J4 239 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 STN1Q9H668 368 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 CNOT8Q9UFF9 292 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 FARSAQ9Y285 508 aaKnown RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.22□□□□□ -0.611e-7■■■■□ 23.9
SUPT16H-202ENST00000552829 SLC30A1Q9Y6M5 507 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 OR5K4A6NMS3 321 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 KIF1CO43896 1103 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 MFAP3LO75121 409 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 SOCS5O75159 536 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 SLC2A4P14672 509 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 SCNN1BP51168 640 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 DENND2CQ68D51 928 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PWWP2BQ6NUJ5 590 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 FAM199XQ6PEV8 388 aaPredicted RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 TMEM26Q6ZUK4 368 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 ZNF765Q7L2R6 523 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 TSPAN33Q86UF1 283 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 ARHGAP12Q8IWW6 846 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 IQCKQ8N0W5 287 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 TC2NQ8N9U0 490 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 AVL9Q8NBF6 648 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 SCRN2Q96FV2 425 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 CELF6Q96J87 481 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PLEKHG4BQ96PX9 1271 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 ERGIC2Q96RQ1 377 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 AGAP2Q99490 1192 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 VPS18Q9P253 973 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 CNOT6Q9ULM6 557 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 FZD10Q9ULW2 581 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PHTF1Q9UMS5 762 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 SIK3Q9Y2K2 1263 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 PCDHGC4Q9Y5F7 938 aa11.21□□□□□ -0.61
SUPT16H-202ENST00000552829 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.62
SUPT16H-202ENST00000552829 ANKRD12Q6UB98 2062 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 TTC24A2A3L6 582 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 GOLGA6CA6NDK9 693 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 GOLGA6BA6NDN3 693 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 ARHGAP42A6NI28 874 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 ESPNB1AK53 854 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 CREB3O43889 395 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 CPP00450 1065 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 CYP1A1P04798 512 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 MMEP08473 750 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 GOLGA6DP0CG33 693 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 CYP2A6P11509 494 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 TYRP1P17643 537 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 NELFEP18615 380 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 XRCC1P18887 633 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 HTR7P34969 479 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 RFC1P35251 1148 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 CLCNKAP51800 687 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 RPS15P62841 145 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 IL10RBQ08334 325 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 TRIM14Q14142 442 aa11.2□□□□□ -0.62
SUPT16H-202ENST00000552829 TESK1Q15569 626 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms