RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 AMD1P17707 334 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 CES1P23141 567 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 CAPZBP47756 277 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 CLCNKAP51800 687 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 RPL26P61254 145 aaKnown RBP16.09■□□□□ 0.17
RAB5C-209ENST00000552162 APTXQ7Z2E3 356 aaKnown RBP16.09■□□□□ 0.17
RAB5C-209ENST00000552162 PRSS42Q7Z5A4 293 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 LRRC49Q8IUZ0 686 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 CT55Q8WUE5 264 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 TRIM55Q9BYV6 548 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 OR2AG1Q9H205 316 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 PCDH9Q9HC56 1237 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 MRPL47Q9HD33 250 aaKnown RBP16.09■□□□□ 0.17
RAB5C-209ENST00000552162 ARFGAP3Q9NP61 516 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 RPL26L1Q9UNX3 145 aaKnown RBP16.09■□□□□ 0.17
RAB5C-209ENST00000552162 ADGRG1Q9Y653 693 aa16.09■□□□□ 0.17
RAB5C-209ENST00000552162 KIF1CO43896 1103 aaKnown RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 SPAG6O75602 509 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 RECKO95980 971 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 MT-ND3P03897 115 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 SLC19A1P41440 591 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ZNF165P49910 485 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 MYL5Q02045 173 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 SEMA5AQ13591 1074 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 SEPT7Q16181 437 aaKnown RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ASIC2Q16515 512 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 PLA2G4EQ3MJ16 856 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ANKRD20A8PQ5CZ79 823 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ZNF648Q5T619 568 aaPredicted RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 PPP1R3BQ86XI6 285 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 MAML1Q92585 1016 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 RSC1A1Q92681 617 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 TRIM11Q96F44 468 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 BRD8Q9H0E9 1235 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ACTL8Q9H568 366 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 LHX9Q9NQ69 397 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 ZNF624Q9P2J8 865 aaPredicted RBP16.08■□□□□ 0.16
RAB5C-209ENST00000552162 PADI1Q9ULC6 663 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 SHANK1Q9Y566 2161 aa16.08■□□□□ 0.16
RAB5C-209ENST00000552162 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 LRRC10BA6NIK2 292 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 C21orf140B9A014 251 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.161e-18■■■□□ 16.5
RAB5C-209ENST00000552162 TIAF1O95411 115 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 MYBL1P10243 752 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 SLC25A11Q02978 314 aaKnown RBP16.07■□□□□ 0.16
RAB5C-209ENST00000552162 GALNT2Q10471 571 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 KRT81Q14533 505 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 INSCQ1MX18 579 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
RAB5C-209ENST00000552162 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 CACHD1Q5VU97 1274 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 TIGD7Q6NT04 549 aaPredicted RBP16.07■□□□□ 0.16
RAB5C-209ENST00000552162 FAM92BQ6ZTR7 304 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 ARRDC2Q8TBH0 407 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 SPATA16Q9BXB7 569 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 HAUS2Q9NVX0 235 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 RBM22Q9NW64 420 aaKnown RBP eCLIP16.07■□□□□ 0.16
RAB5C-209ENST00000552162 AMACRQ9UHK6 382 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 CREBBPQ92793 2442 aa16.07■□□□□ 0.16
RAB5C-209ENST00000552162 ESPL1Q14674 2120 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 PDZK1P1A8MUH7 402 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 GPR89AB7ZAQ6 455 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 MATN3O15232 486 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 SEMA7AO75326 666 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 SLC25A14O95258 325 aaPredicted RBP16.06■□□□□ 0.16
RAB5C-209ENST00000552162 HLA-DQB2P05538 268 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 GPR89BP0CG08 455 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 RNF224P0DH78 156 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 PGDP52209 483 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 NIPAL4Q0D2K0 466 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
RAB5C-209ENST00000552162 QPCTQ16769 361 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 NADK2Q4G0N4 442 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 CPZQ66K79 652 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
RAB5C-209ENST00000552162 NCBP2-AS2Q69YL0 99 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 IRGCQ6NXR0 463 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 CYB5D1Q6P9G0 228 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 KLHL6Q8WZ60 621 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 SEC14L1Q92503 715 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 RUFY1Q96T51 708 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 MLPHQ9BV36 600 aaPredicted RBP16.06■□□□□ 0.16
RAB5C-209ENST00000552162 POT1Q9NUX5 634 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 SLC23A2Q9UGH3 650 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 DNAJC16Q9Y2G8 782 aa16.06■□□□□ 0.16
RAB5C-209ENST00000552162 ANKRD66B4E2M5 251 aa16.05■□□□□ 0.16
RAB5C-209ENST00000552162 CHUKO15111 745 aa16.05■□□□□ 0.16
RAB5C-209ENST00000552162 SORBS2O94875 1100 aaKnown RBP16.05■□□□□ 0.16
RAB5C-209ENST00000552162 CD48P09326 243 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms