RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SNX15Q9NRS6 342 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 BLOC1S4Q9NUP1 217 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 IFT80Q9P2H3 777 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 LRIT1Q9P2V4 623 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 LRWD1Q9UFC0 647 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TUBGCP4Q9UGJ1 667 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SIX4Q9UIU6 781 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CPSF3Q9UKF6 684 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PILRBQ9UKJ0 227 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 KLK13Q9UKR3 277 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ANGPTL2Q9UKU9 493 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 AMFRQ9UKV5 643 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 NEUROG3Q9Y4Z2 214 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 YIPF1Q9Y548 306 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PCDH15Q96QU1 1955 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MYH6P13533 1939 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ITPR2Q14571 2701 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 A0A087WV48 116 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SAC3D1A6NKF1 404 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SLC38A8A6NNN8 435 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 C4orf47A7E2U8 309 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PP2D1A8MPX8 630 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 LACTBL1A8MY62 500 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TISP43B9A030 160 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 J3KRW8 73 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 QSOX1O00391 747 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF197O14709 1029 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 HOXC11O43248 304 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SPRY2O43597 315 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 HCRTO43612 131 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TOM1L1O75674 476 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 URI1O94763 535 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 NOL4O94818 638 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 OAS1P00973 400 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 FAM163BP0C2L3 166 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CISD3P0C7P0 127 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZDHHC11BP0C7U3 371 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MCF2P10911 925 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 HAPLN1P10915 354 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ENGP17813 658 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MAKP20794 623 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TNFAIP3P21580 790 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MATN1P21941 496 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 NMT1P30419 496 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 GRK5P34947 590 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 THBS4P35443 961 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KRT9P35527 623 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PCP4P48539 62 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CACNA2D1P54289 1103 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SLC12A3P55017 1021 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 NLRP5P59047 1200 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 VAMP2P63027 116 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 E2F1Q01094 437 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 POU5F1Q01860 360 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MPP3Q13368 585 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DNASE1L3Q13609 305 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RUNX3Q13761 415 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KRT32Q14532 448 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PDIA5Q14554 519 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PON2Q15165 354 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 FAM153CQ494X1 144 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 GALNTL6Q49A17 601 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 AASDHQ4L235 1098 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CTXN3Q4LDR2 81 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM119Q4V9L6 283 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZC2HC1CQ53FD0 456 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KCNT1Q5JUK3 1230 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 L1TD1Q5T7N2 865 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ATF7IP2Q5U623 682 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 SNX30Q5VWJ9 437 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A2PQ658T7 463 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 TXNDC8Q6A555 127 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DGAT2L7PQ6IED9 249 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 GRHL2Q6ISB3 625 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ACSM6Q6P461 480 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ANKRD16Q6P6B7 361 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RHBDF2Q6PJF5 856 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 Q6ZNX1 250 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DPY19L3Q6ZPD9 716 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PAQR9Q6ZVX9 377 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 Q6ZWC4 215 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 USP51Q70EK9 711 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RHOUQ7L0Q8 258 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 RSRC2Q7L4I2 434 aaKnown RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CACNA2D4Q7Z3S7 1137 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MAATS1Q7Z4T9 603 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ANKS1BQ7Z6G8 1248 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MRGPREQ86SM8 312 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 MON1AQ86VX9 555 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CPOQ8IVL8 374 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 EFCAB13Q8IY85 973 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ADGRF2Q8IZF7 708 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 CMTM8Q8IZV2 173 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 ESX1Q8N693 406 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.47□□□□□ -2.01
CPSF6-207ENST00000551516 PNPLA1Q8N8W4 532 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 FSIP1Q8NA03 581 aa2.47□□□□□ -2.01
CPSF6-207ENST00000551516 IL17RCQ8NAC3 791 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms