RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 GPLD1P80108 840 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 NR1D2Q14995 579 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 ADGRG6Q86SQ4 1221 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 PIM3Q86V86 326 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 TRAPPC5Q8IUR0 188 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 NAGSQ8N159 534 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 HEXDCQ8WVB3 486 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 FGF11Q92914 225 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 ULK4Q96C45 1275 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 AHCYL2Q96HN2 611 aaKnown RBP13.16□□□□□ -0.3
CEP290-205ENST00000550962 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 APOL2Q9BQE5 337 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 SMOXQ9NWM0 555 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 KCNK6Q9Y257 313 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 R3HDM2Q9Y2K5 976 aaKnown RBP13.16□□□□□ -0.3
CEP290-205ENST00000550962 PRKAB1Q9Y478 270 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 ENTPD2Q9Y5L3 495 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
CEP290-205ENST00000550962 CFAP99D6REC4 459 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 BRINP1O60477 761 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 SNX2O60749 519 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 DXOO77932 396 aaKnown RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 AP2A1O95782 977 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CAPNS1P04632 268 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 F3P13726 295 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 MSH3P20585 1137 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 ITGALP20701 1170 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 IDSP22304 550 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CCKBRP32239 447 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 HALP42357 657 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 HHEXQ03014 270 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 TMEM115Q12893 351 aaPredicted RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 CHRNA6Q15825 494 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CCNG2Q16589 344 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 TBC1D25Q3MII6 688 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CRTC3Q6UUV7 619 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 TRIM48Q8IWZ4 208 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 KLHDC8BQ8IXV7 354 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 DNAAF3Q8N9W5 541 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 DDHD1Q8NEL9 900 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 OR4K2Q8NGD2 314 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 OR10G6Q8NH81 332 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 ZNF398Q8TD17 642 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 DCUN1D1Q96GG9 259 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 NAP1L3Q99457 506 aaPredicted RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 CMKLR1Q99788 373 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 EPB41L1Q9H4G0 881 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 KCNK4Q9NYG8 393 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 PAK5Q9P286 719 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 RAXQ9Y2V3 346 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 ARL5AQ9Y689 179 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
CEP290-205ENST00000550962 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
CEP290-205ENST00000550962 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 PDZK1P1A8MUH7 402 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 AP3B1O00203 1094 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 DUX1O43812 170 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 MPOP05164 745 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 JMJD7P0C870 316 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
CEP290-205ENST00000550962 CDH17Q12864 832 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
CEP290-205ENST00000550962 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 GSTA5Q7RTV2 222 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
CEP290-205ENST00000550962 ZNF248Q8NDW4 579 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 SNIP1Q8TAD8 396 aaKnown RBP13.14□□□□□ -0.31
CEP290-205ENST00000550962 SLC37A2Q8TED4 501 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 ASB8Q9H765 288 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 VPS37BQ9H9H4 285 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 JRKLQ9Y4A0 524 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 PLEKHM1Q9Y4G2 1056 aa13.14□□□□□ -0.31
CEP290-205ENST00000550962 F8W8V4 182 aa13.13□□□□□ -0.31
CEP290-205ENST00000550962 PLD2O14939 933 aa13.13□□□□□ -0.31
CEP290-205ENST00000550962 BUD23O43709 281 aaKnown RBP13.13□□□□□ -0.31
CEP290-205ENST00000550962 CEP104O60308 925 aa13.13□□□□□ -0.31
CEP290-205ENST00000550962 MTX2O75431 263 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms