RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	SNRPB2	P08579	225 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	IDO1	P14902	403 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF7	P17097	686 aa	Predicted RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	MSH3	P20585	1137 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	EPHA3	P29320	983 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	AVPR1A	P37288	418 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	RGS4	P49798	205 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	SLC25A3	Q00325	362 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	UBE3A	Q05086	875 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	DMC1	Q14565	340 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	ACCSL	Q4AC99	568 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	PIGG	Q5H8A4	983 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	MIA3	Q5JRA6	1907 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	SAMD4B	Q5PRF9	694 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	RBM20	Q5T481	1227 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	RNF219	Q5W0B1	726 aa	Predicted RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	CES5A	Q6NT32	575 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	DHDDS	Q86SQ9	333 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	ADAMTSL2	Q86TH1	951 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	FAM9C	Q8IZT9	166 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	TTC9B	Q8N6N2	239 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	VN1R2	Q8NFZ6	395 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	MAPK15	Q8TD08	544 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	DUS3L	Q96G46	650 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	DNAJC1	Q96KC8	554 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	GCNA	Q96QF7	691 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	LYSMD1	Q96S90	227 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	TRIM15	Q9C019	465 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	GSTO2	Q9H4Y5	243 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	RAD18	Q9NS91	495 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	RIC8B	Q9NVN3	520 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	GID8	Q9NWU2	228 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	NMRK1	Q9NWW6	199 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	SUCO	Q9UBS9	1254 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	SCOC	Q9UIL1	159 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	TRMT6	Q9UJA5	497 aa	Known RBP	11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	SLC30A1	Q9Y6M5	507 aa		11.73	□□□□□ -0.53
LETMD1-223	ENST00000550442	FANCM	Q8IYD8	2048 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442		A0A0D9SEW6	157 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	LOC100653049	A0A140TA62	436 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CBX4	O00257	560 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	TRIM38	O00635	465 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PRMT5	O14744	637 aa	Predicted RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	AZIN1	O14977	448 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PI15	O43692	258 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	KIF1C	O43896	1103 aa	Known RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	DNAJA2	O60884	412 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	BCAS2	O75934	225 aa	Predicted RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	KRT34	O76011	436 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	KRT36	O76013	467 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ASGR2	P07307	311 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CBSL	P0DN79	551 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	UROS	P10746	265 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	MBL2	P11226	248 aa	Predicted RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	HDC	P19113	662 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CBS	P35520	551 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CPA2	P48052	419 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PIK3CG	P48736	1102 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	NUDT2	P50583	147 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ARSD	P51689	593 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	EPHB1	P54762	984 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CDKN2D	P55273	166 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CDH18	Q13634	790 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PTK2B	Q14289	1009 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	MMEL1	Q495T6	779 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	RARS2	Q5T160	578 aa	Known RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	SPOUT1	Q5T280	376 aa	Known RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	GPR158	Q5T848	1215 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	VWA5B1	Q5TIE3	1220 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PDE12	Q6L8Q7	609 aa	Known RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CXorf57	Q6NSI4	855 aa	Known RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	TMEM184A	Q6ZMB5	413 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442		Q6ZNB5	142 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	TAS1R1	Q7RTX1	841 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	KDELC2	Q7Z4H8	507 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	SNX32	Q86XE0	403 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PHTF2	Q8N3S3	785 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ADCY4	Q8NFM4	1077 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	OR7D4	Q8NG98	312 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	OR4K2	Q8NGD2	314 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	OR56A4	Q8NGH8	313 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	FIBIN	Q8TAL6	211 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	GPR152	Q8TDT2	470 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ASB9	Q96DX5	294 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	C19orf60	Q96EN9	201 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ATOH8	Q96SQ7	321 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	CEP44	Q9C0F1	390 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	KLHL4	Q9C0H6	718 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	ALG9	Q9H6U8	611 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	WDR41	Q9HAD4	459 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	SPAG4	Q9NPE6	437 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	LATS2	Q9NRM7	1088 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	NUDT4	Q9NZJ9	180 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	PDP2	Q9P2J9	529 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	FBXL21	Q9UKT6	434 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	RNF112	Q9ULX5	631 aa		11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	MTF2	Q9Y483	593 aa	Predicted RBP	11.72	□□□□□ -0.53
LETMD1-223	ENST00000550442	OR51B4	Q9Y5P0	310 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms